Pseudomonas putida HB3267: B479_00220
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Entry
B479_00220 CDS
T02389
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuh03016
]
B479_00220
03036 Chromosome and associated proteins [BR:
ppuh03036
]
B479_00220
Transfer RNA biogenesis [BR:
ppuh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
B479_00220
Prokaryotic type
B479_00220
Chromosome and associated proteins [BR:
ppuh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
B479_00220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
Thi4
HI0933_like
Pyr_redox
Pyr_redox_3
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AGA70962
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Position
complement(48709..50601)
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AA seq
630 aa
AA seq
DB search
MDFPSRFEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLV
KEIDALGGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWI
FQQSCDDLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPS
IALAHRMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAQMHPRQV
SCWITHTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPE
GLTTHELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETK
VIGGLFFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITL
GTQEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRL
KSTWVRPNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIEATGGEAIDPQVAEQV
EIRTKYAGYIDRQQDEIARLRASEDTRLPVDIDYSTISGLSKEIQGKLGQTRPETLGQAS
RIPGVTPAAISLLLIHLKKRGAGRELEQSA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
gtggatttcccttcccgttttgaagtgatcgtcatcggcggcggccatgccggtaccgag
gctgcgcttgcgtctgcacgcatgggtgtgaaaaccctgttgttgacccataacgtggaa
accctcggtcacatgagctgcaaccccgccattggcggtattggcaaaagccatctggtc
aaagagatcgatgccctcggcggcgccatggcgctggccaccgacaagagcggcatccag
ttccgcgttctgaacaaccgcaagggcccggctgtacgcgccacccgtgcacaggccgac
cgcgccatctacaaggcagtggtgcgtgaaatcctggaaaaccagccgaacctgtggata
ttccagcagtcctgcgacgacctgatcgtcgagcaggaccaggtcaaaggcgtggtgacc
cagatgggcctgcgtttcttcgccgaatcggtggtactgaccaccggtaccttcctcggc
gggcttatccacattggtttgcaaaaccattccggtggtcgcgccggcgatccaccttcg
attgccctggcccaccgcatgcgtgaactgccgctgcgggtcggccgcctgaaaaccggt
accccgccacgcatcgacggccgctcggtggacttctcggtaatgaccgagcagccaggc
gatacgccgattccggtgatgtcgttcatgggcaatgcccagatgcacccgcgtcaggtg
agctgctggattacccacaccaatgcgcgcacccacgagatcatcgcctcgaacctcgac
cgttcgccgatgtactcgggtgtcatcgaaggtgttggcccgcgctactgcccgtcgatc
gaagacaagatccaccgcttcgccgacaaggaaagccaccaggtgttcattgagccggaa
ggcctgaccacccatgagctgtaccccaacggtatttccacttcgctgccgttcgacgtg
cagctggagctggtgcggtcgatccgtggcatggagaacgcccacatcgtgcgcccgggc
tatgccatcgaatacgactacttcgacccgcgtgacctcaagtacagcctcgagaccaaa
gtcatcggcggcctgttcttcgccggccagatcaacggcaccaccggttacgaagaagcc
ggcgcccaaggtttgctggccgggaccaacgcggccctgcgggcgcagggccgagacagc
tggtgcccgcgccgcgacgaggcatacatcggcgtactggtcgacgacctgattaccctg
ggtacccaggagccgtaccgcatgttcacttcgcgtgccgagtaccgcctgatcctacgc
gaagacaacgccgacctgcggctgaccgaaaagggccgtgaactcggcctgatcgacgac
cagcgttgggccgccttctgcgccaagcgcgacggcatcgaacgcgaggagcagcgcctg
aagtcgacctgggtacgcccgaacaccgagcaaggccaggcgattgtggataagttcggt
accccgctcagccacgagtacagcctgctcaacctgctggcgcgcccggaaatcgactac
gccggcctgatcgaggcaaccggcggcgaagcgatcgatccacaggtcgccgagcaggtc
gaaattcgcaccaagtacgccggctacatcgaccgccagcaggatgaaatcgcacgtctg
cgcgccagcgaagacacccgcctgcctgtggatatcgattactcgacgatttccggcctg
tccaaggaaatccagggcaagctgggccagacccgtccggaaaccctgggtcaggcttcg
cgtatcccgggcgtgaccccggcggcgatttccctgttgctgattcacttgaaaaaacgc
ggcgctggccgcgaattggagcaaagcgcttga
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