Pogoniulus pusillus (red-fronted tinkerbird): 135182577
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Entry
135182577 CDS
T10504
Symbol
XPC
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135182577 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppus03400
]
135182577 (XPC)
DNA repair and recombination proteins [BR:
ppus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
135182577 (XPC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
135182577
NCBI-ProteinID:
XP_064012904
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Position
16:complement(18634978..18650063)
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AA seq
956 aa
AA seq
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MARKRKASPRPAAARKRRSGVPSVSGDEPDEEENDFEEKKPNKKESNSKALARKKEKDCH
AGVSNSAAKPSKQKGANSLTKESPKNARIKGNHDKEKMCSDLLQPLPKEIKLERESPVKK
EMDEGSNDENDDDESEDEWEDVEELQEPATDKLEVAALPAEVLPSNPVEIEIETPEQVKK
RQRREKREAEFEMYLRRIRKRFSKEVREDTHKVHLLCLLANGFYRNRICNQPDLHAIGLS
VIPTHFTKVPAGQVDLLYLSNLVKWFVGTFTVNDELSTEKEEPLQSTLERRFAIYAARDD
EELVHIFLIILRALQLLCRLVLSFQPVPLKEIKAKGSSSSKRQSLSHTSEGQKSSVSTPK
AVAKKCPCRKDKEDVKSLESKEDKGPEKPSAAQTKSTRKSKLTTSSQEQEESNNEEGSLA
GKDVPVRPKNARRRRVASKVCYKEESGSDEDSVSEFEISEEESNLSDEDFETVPKRQRSS
LGSQKSKLTTEKKPKTNTSEPRLSKNVCATEPKPGKSTAPHEQRKRNKIISSDEDDGQQE
VKKVMGTDQWLEVFLKREDKWVCVDCVHGNVGQPQQCYKYATKPLSYIVGFDNDGSVREV
TQRYDPAWMTATRKSRVDPEWWEDTLQPYKSPYVERDKKEENEFQVKLQDQPLPTAIGEY
KNHPLYALKRHILKYQAIYPESAAILGYCRGEAVYSRDCVHTLHSKDTWLKQARVVRIGE
VPYKMVKGFSNQARKARLAEPANQDKEDLALFGRWQTEEYQPPIAVDGKVPRNEYGNVYL
FLPSMLPIGCVHLRLPNLNRLARKLDIDCAQAITGFDFHGGYSHPITDGYIVCEEYKEVL
IAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSIKTESFMPQTEKGEG
FSSDEGDPSSETAVGNTALSWPQNRQLEKKNEETTTRKSKREKKGEAAQLFPFEKL
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggctaggaagcgcaaggcgtcgccccggcccgcggctgccaggaaaagacgctccggg
gtgccgagtgtatcgggggacgagcccgacgaggaggagaatgactttgaagagaaaaag
cccaataaaaaggagagtaactcaaaagccttggctaggaagaaggaaaaagattgtcac
gctggagtttccaactcggcagctaagccatcaaaacaaaaaggggcaaattcactaaca
aaagaaagccccaaaaatgctagaattaaagggaatcacgacaaagagaaaatgtgcagt
gacttgctgcagcccctgccaaaagagataaagttggaaagagaatctcctgttaaaaaa
gagatggatgaaggcagtaatgatgaaaatgatgatgatgaaagtgaagatgaatgggag
gatgtggaagaactccaggaacctgccacagataaattagaagttgctgctcttccagca
gaagttctgccaagcaatcctgttgagatagagattgaaacccctgagcaggtgaagaaa
agacagaggagagaaaaaagggaagctgagtttgagatgtatcttcggagaataaggaaa
cgtttcagcaaggaggttcgtgaggacacacataaggttcacctcttgtgtttattagca
aacggtttttacagaaacaggatctgcaaccagccagatcttcatgccattggtctatct
gtcatccctacccacttcacaaaagtgcctgcaggccaagtggaccttctctacctttcc
aacttggtaaaatggtttgttggaaccttcactgtcaatgatgagctttccactgaaaaa
gaagagccccttcagtcaaccttggagcggcgatttgccatctatgctgcacgagatgat
gaagagttggttcatatatttttgattattctgagggcattacagttgctctgtcgcctc
gtgctgtcttttcagcctgttcctctcaaggagataaaagcaaaggggagtagctcatcc
aagaggcagtctctcagtcatacctctgaggggcagaagagctctgtttcaacacccaaa
gctgtggcaaaaaaatgcccgtgcaggaaagacaaggaggatgtgaaatccttggagagc
aaagaagacaagggaccagagaaacccagcgctgctcagaccaaaagcacacgcaagtca
aagttgactacaagcagccaggagcaggaggaatctaataatgaggagggcagtttagca
ggaaaagatgtgccagtcaggcctaaaaatgctcgccggagacgagttgcctccaaagtg
tgttacaaagaagaaagtggaagtgatgaggacagtgtttcagagtttgagatttcagag
gaggagagcaatctatctgatgaggattttgaaactgtccctaaaaggcagaggagctca
ctgggctcccagaagtcaaagctaacaactgaaaaaaaaccaaagaccaatacttcagaa
ccaaggctgtccaaaaatgtgtgtgccactgaacctaagccaggaaaaagtacagctcct
catgagcagagaaagagaaacaaaataatttctagtgatgaggatgatggccagcaggag
gtaaagaaagtgatgggcacagaccagtggctggaggttttccttaaacgtgaggacaag
tgggtgtgtgtagactgtgtccatggcaatgttggccagccccagcagtgctacaagtat
gccacaaagcctctttcctacattgtggggtttgacaatgatgggagtgtgagggaggtg
acccaaagatacgacccagcatggatgactgcaacaaggaagagccgtgtggaccctgag
tggtgggaagatacactgcagccatataagagtccctatgtggaaagagacaagaaggag
gaaaatgagtttcaagttaagcttcaagatcagcctctaccaacagcaattggagagtac
aaaaaccaccctctttatgcactgaagaggcacatcttgaaatatcaggcgatctatcct
gagtcagctgctatcctagggtactgcaggggagaggctgtctactccagggactgtgta
catacgctgcactccaaggacacctggctgaagcaagctcgagtggtgaggattggagaa
gtaccttacaagatggtgaaaggattttccaaccaggcgaggaaggcacgccttgcagag
cctgcaaaccaagacaaagaagacctggcactgtttggtcgctggcagacagaggagtat
cagccacccatagcagtggatgggaaggttccccggaatgaatatggaaacgtctatctc
ttcctaccatccatgttacccattggctgtgtgcatctgaggctcccaaatctgaacaga
ttggcacggaagctggacattgactgtgctcaagccatcactggatttgattttcatggt
ggctattcacatcccattaccgatggctatattgtctgtgaggagtataaagaggtcctc
attgctgcctgggagaatgaacaagcagaaatagaaaagaaagagaaggagaagcgtgag
aaaagagctctggggaactggaagttgctgacaaaaggacttctcatcagagagagactg
aagcaacgctattccatcaagactgagtcattcatgccccagacagagaaaggagagggt
ttctcttcagatgaaggagatccaagttcagagactgcagtagggaatacagccctttcc
tggccccaaaatcgccagttagagaaaaagaatgaagagacaacaactcgaaagagcaag
cgagaaaagaaaggagaagctgcacagttgttcccttttgagaagctgtga
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