Pogoniulus pusillus (red-fronted tinkerbird): 135185112
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Entry
135185112 CDS
T10504
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
135185112 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppus03000
]
135185112 (IRF1)
Transcription factors [BR:
ppus03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135185112 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
SMP_MUG190-like
Motif
Other DBs
NCBI-GeneID:
135185112
NCBI-ProteinID:
XP_064017574
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Position
22:4444701..4454944
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AA seq
318 aa
AA seq
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MPVSRMRMRPWLEMQINSNQIPGLIWINKDKRIFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKVGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKAQK
KERKSKSSREARSRSKRKLHEDTKIEESAEGLTNTSLPDDHSSYTVHNYTGQEVEVDSPS
ISLDLSSCEVSGSLTEWRPSMEITMADSTNDLYQLQVSPLASSSEVTDEDEEEMKSEILK
LLEPAQDWHATSVGGKGFLINELGTQSMCSTYSYKEQDGEIDTTSGELEFRLLDQKNILD
FSWLETVRPSMQVIPCGL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgtcaagaatgcgcatgaggccctggctggaaatgcagatcaattccaaccaa
atccctgggctgatatggattaacaaggataagaggatattccagatcccgtggaaacat
gcagctaagcatggctgggacatggagaaggatgcctgccttttcaggagctgggccatt
catacaggacgatacaaagtaggggagaaggatcccgatcccaaaacctggaaggcaaac
ttccgctgcgccatgaactcgctgcctgacatcgaagaggtgaaggataaaagcatcaac
aaaggctccagtgctgtcagggtgtacaggatgctgccacccttgacaaaggctcagaag
aaagaaaggaagtcaaagtcttcaagagaagcaagaagcaggagcaagagaaagctgcat
gaagatacaaagatagaggagtcagcagaaggactaaccaacacttctctgccagatgac
cacagcagctacactgttcacaactacacgggacaggaagtggaggttgatagcccgtct
atcagcttagacctctcctcatgtgaggtgagtggctccttgactgagtggaggccatcg
atggaaatcaccatggctgacagcaccaatgacctctaccagctccaggtgtcccctctg
gcttcatcctcagaagtcacagatgaagatgaggaggaaatgaaatcggagatcttaaag
ctgcttgagccagcccaagactggcatgccaccagtgttggggggaaaggcttcctcatc
aacgagctgggcacacagagcatgtgcagcacctacagctacaaggagcaggatggggag
atcgacacaacttcaggagagctggagttcaggctcctggaccagaaaaacatcctggac
ttctcctggctggagacagtgagacctagcatgcaggtcattccctgtggcttgtaa
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