Pogoniulus pusillus (red-fronted tinkerbird): 135186313
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Entry
135186313 CDS
T10504
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppus04040
]
135186313 (SCN2A)
Ion channels [BR:
ppus04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135186313 (SCN2A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
IQCJ-SCHIP1
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
135186313
NCBI-ProteinID:
XP_064020017
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All DBs
Position
2:complement(45253899..45354726)
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AA seq
2017 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRINEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISYFNSSV
GENGTFINTTMTIFNWDEYIEDRSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKRKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTIPPLPANGKMHSTVDCNGVVSLVGG
PPALSPTGQLLPEVMIDKAATASNGTTTETDLRKRRSSSYHVPMDYLTDPSARQRAMSIA
SMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITIC
IVLNTLFMAMEHYPMTDQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDG
FIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVL
AIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMW
DCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVA
RIQKGIDYVKRKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSYISNHTIVEIGKNLTYL
KEGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDL
EESKEKLNASSSSEGSTVDIGLPQEGEQPEAEPEESLEPEACFTEGCVRRFKCCQVSVED
GKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKV
FTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTL
RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVN
TTTDERFDITQINNYSQCEELIRNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIM
YAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDI
FMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTM
MVETDDQSEDMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVG
MFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLF
LVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGE
PDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAE
PLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVS
GDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVS
AVIIQRAYRRHLLRQKVKKVSCIFNQDKGKDEDDLPTKEDMIMDKLNENSTPEKTDMTPS
TTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSREGKK
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagtttccggtacttcacaagagaa
tccctggcagctattgagcagcgcatcaatgaagaaaaagctaaaaagtccaaacaggaa
cgcaaagatgatgatgatgaagatggcccaaagccaaatagcgacttggaggcaggaaag
acactgccatttatttatggagacatacctccaggaatggtatccgaacccttggaagac
ctggatccatattacatcaataagaaaacctttatagtattgaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaag
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacctttcttcgagacccatggaactggctagatttcactgtcattaca
ttcgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactattgtgggagcc
ctaattcagtctgtgaagaagctctcagacgtaatgatcctgactgtgttttgtctgagt
gtatttgcgctcatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttcctactttaatagctctgta
ggtgaaaatggtacatttattaatacaacaatgacaatattcaactgggacgagtacatc
gaagacagaagtcatttctacttcttggaagggcaaaatgatgctctgctgtgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactgcgtgctgctgggaagaca
tacatgatattttttgttttggtcattttcctgggttctttctacctgattaacttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaaccatggaagaagcagaa
cagaaagaagcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcagcagcagcagctgcagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctccgaaagttcttctgaggcatcaaaactaagctcaaagagtgctaaagag
aggaggaatagaagaaagaaaaaaaagcaaaaagaacaatctgaaggcgaggagaaggat
ggggaagaatttcacaagtctgaatcagaggacagcatcaaaaggaaaggtttccgattt
tccattgaggggaacagactgacatacgaaaagagattttcttccccacaccagtctttg
ctgagcattcgaggctccctgttttccccaaggcgcaatagcagaacgagtcttttcagc
ttcagaggtcgagcaaaggatgtaggatctgaaaacgactttgctgatgatgagcacagc
acttttgaagacaatgagagcagaagagattctctctttgttcctcatagacacggcgaa
cggcgcaacagtaacattagtcaggccagtaggtcatccaggacaatacctccgctgcca
gcaaatgggaagatgcacagcactgtggattgcaatggagtagtttctttagtcggtggg
ccaccagctttgtcacctactggacagcttctgccagaggtgatgattgataaagcagcc
actgctagcaatggcactactacagaaactgatttaaggaagagacggtctagttcttac
cacgtccctatggactacctgacagaccctagtgcacggcaaagagcaatgagtatagcc
agcatgcttacaaacaccatggaagaactggaagaatccagacagaaatgcccaccatgc
tggtataaatttgctaacacttgcttgatttgggactgctgtactccctggctgaaagta
aagcatattgtaaatttaattgtgatggacccattcgtcgacctggccattactatctgc
attgtcctaaacaccttgttcatggccatggagcactatccaatgactgatcaattcagt
ggtgtactttcagtaggaaaccttgtgtttacaggaattttcacagcagaaatgtttctc
aagataattgccatggatccttactattattttcaagagggctggaatatttttgatggt
tttatcgtgagccttagtttaatggagcttggccttgcaaatgtagaagggctgtctgta
cttcgctcattccgattgcttcgagtgttcaaactggcaaaatcatggccaactctaaat
atgctgattaagatcattggcaactcagtgggagctctggggaatctgaccctggtgctg
gccatcatcgtgttcatttttgctgtggttgggatgcagctgtttgggaaaagctacaag
gaatgtgtctgcaagatctccagtgactgtgaacttccacgctggcacatgcatgacttt
ttccactctttcttgattgtgtttcgagtgctgtgtggagaatggatagaaacaatgtgg
gactgcatggaggttgcaggccaaaccatgtgccttacagtcttcatgatggtcatggtg
attggaaacctagtggtacttaacctctttttggccttgctgctgagctccttcagttca
gacaacctcgctgctacagacgacgataacgagatgaacaatctccagattgctgtggca
aggattcagaagggaatagattatgtgaagaggaaagtgagagaattcatccaaaaagcc
ttcgttagaaagcagaaagttttagacgagatcaaacccctcgaagacctaaataacaaa
aaagacagctatatttccaaccacacaatagtagagataggtaaaaacctcacctatctt
aaggaagggaatggaactaccagtggcataggcagcagcgtggaaaaatatgttgttgat
gaaagtgattacatgtcattcataaacaacccaagcctcaccgtgacagtgccaattgct
gtcggggaatcagactttgaaaatttaaatacagaggagttcagcagtgagtcagatctg
gaagaaagcaaggagaaactgaatgcatccagttcatcagaaggcagcacagttgatatt
ggactacctcaggaaggggaacaaccagaagcagaacctgaagaatctctcgagccagag
gcttgttttacagaaggctgcgtgcggagattcaaatgctgtcaagttagtgttgaagat
gggaaagggaaaatctggtggaatcttaggaaaacctgctataagattgttgaacacaac
tggtttgagacctttattgtcttcatgattctcctcagcagtggtgctctggcatttgaa
gatatatacatagagcaacggaaaactatcaagaccatgctggaatatgctgacaaagtc
tttacctatatcttcattctggaaatgcttttaaaatgggtggcttatggctttcagacc
tatttcactaacgcgtggtgctggctcgacttcctgattgttgatgtctctttggttagc
ttaacagctaatgccttgggctactcagaactgggtgcgattaaatcccttaggacacta
agagctttgagacctctgagagccttgtcgcgatttgaagggatgagggtagttgtgaat
gccctcttgggagcaattccatccattatgaatgtgcttcttgtttgccttatattctgg
ctgatcttcagtatcatgggagtaaatctatttgctgggaaattttactactgtgttaac
actacaactgatgagagatttgatattacccaaatcaacaactacagtcagtgtgaggag
ctcataagaaacaatgaaactgcccgatggaagaatgtgaaggttaactttgataatgta
ggccttggttatctttctctgcttcaagtggctacatttaaaggctggatggatatcatg
tatgcagctgtggattctcgtaatgttttggatcagcctaagtatgaagataacctgtac
atgtatctttactttgtcatcttcatcatttttggatcattctttaccttaaaccttttc
attggtgtcatcatagacaatttcaaccagcagaaaaaaaagtttggaggtcaagacatc
tttatgacagaagaacagaagaaatactacaatgcaatgaaaaagctgggttcaaaaaaa
ccacagaagcctatacctcggccagcaaacaaattccaaggcatggtctttgactttgtc
acaaaacaagcatttgatatcagtatcatgatactcatctgccttaatatggtcacgatg
atggtagaaacagatgatcagagtgaagacatggaaaacattttgtattggatcaacctg
gtgttcattgtccttttcactggagaatgtgtcctgaagctgatttcgcttcgccattac
tacttcactataggctggaacatttttgattttgtggttgtgattctctccatagtaggt
atgttcttagctgagatgattgaaaagtactttgtgtcccccacgctcttcagagtcatc
cgacttgccagaataggtcgcatcctgcgcctcattaaaggcgctaagggcatccgcact
ctgctgtttgccttgatgatgtctcttcctgccctgttcaacattgggctgctgctcttc
ctggtcatgtttatctatgccatatttggcatgtccaacttcgcctatgttaagagggaa
gttgggattgatgacatgttcaactttgagacgtttggcaacagcatgatctgcctgttc
cagattaccacatctgctggctgggatggtttgctagctccaattcttaacagtggggag
ccagactgtgacccccataaagatcacccagggagctctgtgaaaggtgactgcggcaac
ccttccgttgggattttcttctttgtcagctacattatcatatcatttctggtagtggtg
aacatgtacattgctgtgattttggagaacttcagtgttgcaactgaagaaagtgctgag
cccttgagcgaggatgactttgagatgttctatgaagtctgggagaagtttgatcctgac
gcgacacaattcatagagttcagtaagttgtcagactttgcagcttccttagatcctcct
cttcttatagcaaaaccaaacaaagtccagcttattgcaatggacctgcccatggtaagc
ggggacagaattcactgccttgacatcttgtttgctttcacaaagcgtgttctgggggaa
agtggggagatggatgccctcagaatacagatggaagatcggttcatggcagccaatcct
tccaaagtctcctatgaaccaattacaaccacactgaaacgaaagcaggaggaggtatct
gctgtcatcattcagcgtgcttacagacgtcatcttttaaggcaaaaggtcaaaaaagtt
tcgtgtatattcaatcaggataaaggtaaagatgaggatgatctgcccacgaaagaagat
atgatcatggataaactgaatgagaactcaactccagaaaaaacagatatgaccccatcc
acaacctccccaccttcttatgacagtgtaacaaagccagacaaggataaatatgaaaaa
gacaaatcagaaaaagaagataaaggtaaagacagcagggaaggtaaaaagtaa
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integrated database retrieval system
