Pogoniulus pusillus (red-fronted tinkerbird): 135190920
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Entry
135190920 CDS
T10504
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04510
Focal adhesion
ppus04512
ECM-receptor interaction
ppus04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135190920 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135190920 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135190920 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppus00535
]
135190920 (COL9A2)
Proteoglycans [BR:
ppus00535
]
Extracellular matrix (ECM) proteoglycans
Others
135190920 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
135190920
NCBI-ProteinID:
XP_064028798
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Position
37:2939689..2960812
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AA seq
742 aa
AA seq
DB search
MIHPCVPWELGGGCQRRQELSGGSWAQGETAPGLPPYLSSAGRGCRRSVPAAFAMAFPWL
QLWILLQVSCLCLAQIRGPPGEPGPRGPPGPPGVPGADGIDGDKGPAGAPGSPGIKGEPG
APGPDGPPGKPGIDGLTGAKGEPGAIGGPGLKGQPGLPGPPGLPGPSLPGPPGLPGQVGL
PGEIGALGPKGDPGPDGPRGPPGPPGKPGPPGHIQGVEGSADFLCPTSCPPGPKGPQGLQ
GLKGHRGRPGALGEPGRQGRQGPKGDIGLSGEQGIPGPPGPQGPRGYPGMAGPKGETGPA
GYKGMVGTIGAAGRPGKEGPKGPPGDPGEKGDLGGRGIRGPQGDIGPKGENGLPGIDGKD
GTPGIPGVKGSVGQAGHPGTPGHRGQAGLPGQPGSKGGPGDKGEVGARGQPGITGAPGQI
GEPGPRGEQGPQGVPGLKGDRGERGPVGPPGEQGKAGPKGEQGPPGIPGPQGLPGVKGDK
GSPGKTGPKGSTGDPGVHGLVGLKGEKGESGEPGPKGQQGIQGELGFPGPSGDAGAPGGR
GYPGPPGPRGLVGERGVPGMPGRRGVPGKDAGDQHIVDVVLKMMQEQLAEVAVSAKRAAL
GGVGAMGPPGPPGPPGPPGEQGPHGPMGPRGAPGILGAAGQIGNVGPKGKRGEKGERGEV
GRGHPGMPGPPGIPGLPGIPGHALDGKAGERGMPGSPGEAGRPGLPGPAGLPGFCDPAAC
LAASAYAAARLTEPGAVKGPIY
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgattcatccctgtgttccctgggagctggggggtggctgccagagaaggcaggagctg
agtggggggagctgggcacagggtgagacagccccgggactgccaccgtacctgagctcg
gcgggacgaggctgtcgccgctcggtgccagctgcctttgccatggcttttccctggctc
cagctctggatcttgctccaagtctcctgcctctgcctggcccagatcagagggccacca
ggagaacctggcccgcggggcccccccggtcccccaggagtgccgggagctgatggcatt
gacggtgacaaaggccctgctggtgcccctggctccccgggcatcaagggggagcctgga
gcccctggtccagatggacccccagggaagcctggcatcgatggcctgacaggagccaag
ggggagccaggagccatcggtgggccaggactgaaaggccagcctggacttccagggcca
ccagggctccctggtccttcactgccaggaccacctgggcttccaggccaggttgggctt
cctggagagattggagcactgggacccaagggtgaccctggacccgatggcccaaggggt
cccccaggtcctccagggaaaccaggccccccaggacacatccaaggagtggaaggcagt
gctgatttcttgtgccccaccagctgcccaccaggtcccaaaggcccccagggactgcag
ggactgaagggacacagaggccgccctggtgccctcggggagcctggcaggcagggcagg
cagggtcccaagggtgacattggcctgtctggagaacaaggcatcccaggccctccggga
ccccagggcccaagaggttatcctgggatggcaggacccaagggtgagacgggtcctgct
ggttacaaggggatggttggcaccatcggagcggccgggcggccgggcaaggaagggccc
aagggaccacctggggaccctggtgagaagggagatctgggtggccgtggcatcaggggt
ccccaaggagacattggccccaagggggagaatggtctccctggcatcgatggcaaagat
ggcacccctggcatccccggcgtgaagggcagcgtgggacaggctgggcacccaggcacg
ccagggcaccgtggacaagctggcttgccaggccagccaggaagcaaaggtggcccagga
gacaagggtgaagtgggtgctcggggccagcctggcatcactggggcaccagggcagatt
ggtgagcctggccctcgtggtgagcagggacctcagggtgtccccgggctgaagggtgac
cgaggggagcgtggccccgtggggcccccaggagagcagggcaaagcgggaccaaagggt
gagcagggtccaccaggaatcccaggaccccaaggcttgccaggagtcaaaggagataag
ggctccccaggcaaaactggccccaaaggcagcactggagaccctggggtccatggcctc
gtggggctgaagggagagaagggtgaatctggagagccaggcccgaagggacagcaaggc
atccagggggagcttggcttccctggcccctcgggggatgctggagcacctggggggaga
ggctacccaggcccccccgggccacgcggactggtcggggagcgcggcgtgccagggatg
cccggccggaggggagtgccgggcaaggatgctggggaccagcacatcgttgacgtggtc
ctgaagatgatgcaagagcagctggcggaggtggctgtcagtgccaagagagctgcccta
ggtggagtgggtgccatgggaccccctggaccacctggtcctccagggccacctggtgag
caaggcccacacggacccatggggcctcgaggtgcccctggcatcctgggcgctgccggg
cagattggcaacgtaggacctaaagggaagagaggtgagaagggtgagagaggagaagtt
ggacgtgggcacccaggcatgccaggccccccagggatcccaggtctccctggcatccct
ggccatgctctggacggcaaggctggcgagaggggcatgccaggctccccaggcgaggct
ggccgcccgggtctgcccggccctgccggtctgccaggcttctgtgacccagctgcctgc
ctggcagcctcagcctacgcagccgcacgcctgaccgagccaggggctgtcaaaggacca
atctactga
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