Pogoniulus pusillus (red-fronted tinkerbird): 135191972
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Entry
135191972 CDS
T10504
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135191972 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppus03021
]
135191972 (SMARCD2)
03036 Chromosome and associated proteins [BR:
ppus03036
]
135191972 (SMARCD2)
Transcription machinery [BR:
ppus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135191972 (SMARCD2)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135191972 (SMARCD2)
PBAF complex
135191972 (SMARCD2)
GBAF(ncBAF) complex
135191972 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
135191972
NCBI-ProteinID:
XP_064030796
LinkDB
All DBs
Position
40:5652996..5682874
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AA seq
501 aa
AA seq
DB search
MAGRGAFPLSPLPPAAAPPPPGPGPAMLRGPSPAPAAAAAPGYRPMGPAAAQYQRPGMPP
GGRMPMAGMQVGPPGAPPYGAASPMRPGLPQAMMDPFRKRLLTPQAQPPMAAQRRGVKRR
KMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYI
SNTFTPAKEEGEGGERVASWELRVEGKLLEDPSKQKRKFSSFFKSLVIELDKELYGPDNH
LVEWHRLPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAS
IMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFNCVRMRFSEIPMKLAGLLQHPDPIIIN
HTISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIESINQL
KTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRAEFYQQPWAQEAVGRH
IFAKVQQRRQELEQVLGIRLT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggctggccgcggagccttcccgctcagcccgctgcctcctgccgccgccccgccgccc
ccggggcccggccccgccatgctgaggggccccagtccggctccggcagccgctgccgcc
ccgggctaccgccccatgggccccgccgccgcgcagtaccagcgcccagggatgccaccc
ggcggcaggatgcccatggcagggatgcaggtgggaccaccaggggcacctccctatgga
gcagcctccccgatgagacctgggctaccacaggccatgatggaccccttcaggaagcgc
ctgctgaccccccaggcacagccccccatggctgcccagaggagaggggtgaagaggagg
aagatggctgacaaggtcctgccccagaggatccgggagctggtcccagagtcccaggct
tacatggacctgttggctttcgagcgcaagctggaccagaccatcgctcgcaagaggatg
gagatccaagaggccatcaagaagcccctgactcaaaagaggaagctgaggatttacatc
tccaacaccttcaccccagccaaagaagaaggggagggtggggaacgtgtggcctcctgg
gagctgcgtgtggagggcaagctgctggaggatcccagcaagcagaagaggaagttctcc
tccttcttcaagagccttgtgattgagctggacaaagagctgtatgggccagacaaccat
ctggtggagtggcacaggctgcccaccacgcaggagaccgacggcttccaagtgaagcgt
cctggcgacgtcaatgtgaagtgcactctgctgctcatgctggaccaccagcccccgcag
tacaagctggaccctcggctggctcgcctgctgggggtgcacacccagacccgtgccagc
atcatgcaggctctctggctctacatcaagcacaacaagctgcaggacagccacgagaag
gagtacatcaactgcaaccgctacttccgccagatctttaactgcgtccggatgcgcttc
tctgagatcccaatgaagctggcagggctcctgcagcacccagatcccatcatcatcaac
cacaccatcagtgtggaccccaacgaccagaagaagacagcctgctacgacatcgacgtg
gaggtggacgaccccctcaaggctcagatgagcaacttcctggcttccaccaccaaccag
caggagattgcttccctggatgccaagatccacgagaccatcgagtccatcaaccagctg
aagacgcagcgcgacttcatgctgagcttcagcaacaacccccaggacttcatccaggag
tggatcaaatcccaaaggagagacctcaagatcataacagacgtgatcgggaaccccgag
gaggagcggcgagcggagttctaccagcagccctgggcacaggaggctgtgggcagacac
atctttgccaaggtccagcagcgccggcaggaactggaacaagtgctggggatccgcctc
acctaa
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integrated database retrieval system
