Pogoniulus pusillus (red-fronted tinkerbird): 135193169
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Entry
135193169 CDS
T10504
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135193169 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135193169 (SKIC3)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
135193169 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_16
TPR_14
TPR_17
TPR_11
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
ARM_TT21_C
TPR_7
Fis1_TPR_C
TOM20_plant
TPR_Slam
Retrotran_gag_2
TPR_15
TPR_30
Motif
Other DBs
NCBI-GeneID:
135193169
NCBI-ProteinID:
XP_064032775
LinkDB
All DBs
Position
Z:complement(40638482..40704408)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKDYKEALKYCKAVLKQEKANYNAWVFIGLSAAELEQPDQAK
GAYKKAIEYEPNQLLAWQGLASLYEKSNQTDCRGDLAEVYQKLLELYKSRDKQKWCDVCN
KLAELYHQEKKYLEVAELWQKLIEMKQEEGAKKAELHQLWKKKIQFLKGSMQDQDNKTGQ
LLLSAFEHSLNSADTVPGEDHQRLYKDFIQCLTKFPHESTRLEKACKDMMALYPAVTYPL
EVLCLHFLQSGTLSEETLGYFSRLLEVDASNGLGIISCGIKCLQEEKYREAIKNLTEGLQ
KTSQCPAAWYYLAEAYMRIHRHGDALQSCNKALQTLGTAEGPTLRWKNLILQLKAEALIK
TADADAAEEAIKALEQIEDASSNPVVLAVRGQAYLKKGLMDEASKISQELLLSHPDLAES
HALEGFIHYSQKNYEQAEKSFLNAIERNAESAVYHEQLGLTYWFMSDETRRDKGKALTQF
LKAAKLDSNLGSAFRYMGNYYRDVAEDKNRARGCYKKAFELDGADEESGTAAVDLSMELD
DMDTALSVLNEVTAKVGTGAAKWAWLRRGLYYLRIDQPFKAVSDLQTALRADPKDANCWE
CLGEAYLSRGSYMTALKSFRKATELNPELTYSFYQAAAIEQVLGKYESAIAAYQQILKKT
EDYVPALKGLGECHLTLAKSALENYFDRKAMGYIEQALEFFTRAAKHRPDVSCIWKLLGD
TCTSVHVISPTTASVQVPASLLGQNEGKEVLKKSELLSLGGRCYSKALKLMHLPSIWCDL
GINYYRQAEHLTAVGTATSETSELLEKSLQCLKKAVRLDSKNHLHWNALGVVASCSAIGN
YALAQHCFIKSIQAEKINVVAWTNLGVLYLTTGHIEQAHEAFKTAQALEPSYLLCWLGQA
LIAEKVGSFDTMDLFRHTTELCMHDEGAKGYGHWVCSTLQDKSNRNTEVYQYNIVEMNAI
PTAQVVLTKYTERNPDDASAFTMLGYLDDYLHLKKQAAEAYGRAASLLKNSEDTEEYKIA
MQNYGRSLCALGQCDKAIEVYTSIPLTEFDGLVGLALAYFKKGLLEESIKVYEQALSVAE
SEKDKAHVLTAMAIAEYKQNKVDAAQTLLFKCSLKEPCLESLKALCTLGLMKKDVTLASA
ALKELRKHEKWDGSLYERCLITSALCAMQGRNTEVQREICKAIHCKPDDPALWSLLSQLV
PFYAPRKAKAGAVAGNIAQVLDVNRGKEALVDIAVNQLAAGCHMSEDKQNNPLKNIQKAI
HLSPGNPAAWAVLMAACHAENTTARLSCARPPRTGLEMTLLAAVSAQTAEGDLPQSYIQT
LEDWCLCQAVTSLEETGELSAAEALCNKGLKSRPEHPALLLLLRQVQCKQLLQTHRELPD
SILQELHKTVMTTSTSVAAWQWLAETYQSQRMMIGAEMCYRKSLQLASQQGSWHGKLSSL
LRLAMLALEVCMANVSGDHWPALAQEATAEALKLSPCPLASLLQALLQYQRNMAARETRR
MLDRVVHQPGNPESIVSVARWYLLHHLHAKEDPEFIDVLIDNAKANGDVRLLELHEKLSA
ST
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaaggaggtgaaggctgcattgaagagtgctagagaagcaataagaaataaa
gattacaaggaggccttaaaatactgcaaggcagtattgaagcaagaaaaggctaactac
aatgcttgggtgtttattggcttgtcggctgctgagttagagcagcctgatcaggccaaa
ggagcatacaagaaggctattgaatatgaaccaaaccaattactggcatggcagggatta
gcaagtctttatgagaaatccaaccaaacagactgcagaggagacttggcagaggtctac
caaaagcttttggaactctacaagagtagagacaagcagaaatggtgtgatgtatgtaac
aagcttgcagaactctatcatcaagagaagaaatacttagaggtggctgaattatggcag
aagctcatagagatgaaacaggaggaaggtgccaaaaaggcagagcttcatcagctttgg
aagaagaagatccagttcctgaagggcagtatgcaggaccaggataataagactgggcag
ttgcttttgtctgcgtttgagcactcactgaactctgctgacactgttcctggtgaggac
caccaacgtctctacaaggactttattcagtgtttgactaagtttcctcatgaatcaact
aggttggaaaaggcctgtaaggatatgatggctttgtatcctgctgtcacttatccttta
gaagtactttgcttgcactttcttcagtccggtactttgtcagaagagaccctgggctat
ttctctaggcttttggaggtggatgcaagcaatggtctaggcatcatcagctgtggtatc
aaatgcctgcaagaagagaaatacagggaggccataaagaatcttactgaaggtctgcag
aagaccagccagtgtccagcagcatggtattatttggcagaggcatacatgagaattcac
agacacggggatgctctccagtcctgcaataaagctcttcagactcttggaactgctgaa
ggtcctactcttcggtggaagaaccttatcctgcagttgaaagcagaggctttgattaaa
acagctgatgctgatgctgcagaagaagccattaaagcacttgagcagattgaggatgca
agcagcaatccagtggttttagctgtcaggggtcaggcttacctaaagaaaggtttaatg
gatgaagcttcaaagatttcacaggagcttctgttgtcccaccctgatctggctgagtcc
catgctctagagggtttcatccattactcccaaaagaactatgaacaggcagaaaaaagt
tttctgaatgctattgaaagaaatgctgaaagtgcagtgtaccacgagcagctggggctc
acatactggttcatgagcgatgagacaagaagagacaaaggaaaagccctcactcagttc
ttgaaggctgcaaaattggacagcaacttgggcagtgcctttcgttacatgggcaactac
tacagagatgtggctgaggacaaaaatagagctcgtggttgctataagaaggcttttgag
ctggatggagctgatgaagagtctggaacagcagctgtagacctaagcatggaacttgat
gacatggacactgctctgtcagtcctgaatgaggtgactgcaaaagtaggcactggtgca
gccaaatgggcctggcttcgtcgtgggctttactacctgagaattgatcagccattcaaa
gcagtatctgatttgcagacagcactcagggctgatccaaaggatgccaactgctgggag
tgcctaggggaggcttacttgagcagaggtagctacatgacagctttgaaatccttcagg
aaagccactgaactgaacccagagctcacatacagcttttatcaagctgctgcaattgaa
caggtgctaggcaaatatgagagtgctatagctgcctatcaacagatcctgaagaagaca
gaagactatgtgcctgcactgaaaggacttggtgagtgccatctcaccttggcaaaatca
gccctggagaactattttgataggaaagccatgggctacatagagcaagctcttgaattt
ttcaccagggcagcaaagcaccgtcctgatgtctcttgcatctggaaactgcttggagat
acctgcactagtgtacatgtcatctcaccaaccacagccagtgtccaagtcccagcatcc
cttctgggtcaaaatgagggcaaagaggtgctgaagaaaagtgagctgctcagtctggga
ggaaggtgttacagcaaagccttgaaactgatgcatttgcccagcatttggtgtgacctg
gggataaattactatcgacaggcagagcacctcacagcagtgggcactgccacaagtgag
accagtgaactgctggagaagtccttacagtgcctcaaaaaagctgtgaggcttgacagc
aaaaaccatctgcattggaatgcgctcggtgtagttgcttcctgtagtgctattgggaat
tatgctctggcccaacattgcttcatcaaatctatccaagctgagaaaattaatgttgtt
gcctggactaacttaggggttctctatctgacaactggacatattgagcaagctcacgaa
gccttcaagacagcccaggctctggagccttcctacttactgtgttggcttgggcaggct
ctcattgcagagaaagtgggcagctttgacactatggatctcttcaggcacaccactgaa
ctctgcatgcatgatgagggagcaaaaggctatggccactgggtgtgctcgacactgcag
gacaaaagcaacagaaacactgaggtatatcagtacaacattgtcgagatgaatgctatc
ccaacagcacaggtggtcctgaccaaatacacggagagaaacccagatgatgcctctgct
ttcacaatgcttgggtatttggatgattatttgcatctgaagaagcaagcagcagaagcc
tatgggagggcagcttcactgctgaaaaactctgaggacactgaggaatacaagatagca
atgcaaaactatggcaggtccctgtgtgcccttggccagtgtgacaaggccattgaggtt
tacacatccatacccctcactgagtttgatggccttgtgggattagccttggcctacttc
aagaagggtctgctagaagaaagcatcaaagtctatgaacaggccctgtctgttgctgag
tctgagaaggataaagcccatgtcctgactgccatggccatagcagaatacaagcagaac
aaagtggatgctgcacagaccctgctattcaaatgctcattgaaagaaccctgtttggaa
agtctgaaggctctgtgcacactgggtctgatgaagaaggatgtcacactggcatcagca
gccctgaaagagctcaggaagcatgagaaatgggatgggagcctgtatgagaggtgcctc
ataacatctgctctctgtgctatgcagggcaggaacacagaagtacagagagaaatttgc
aaagcaatacactgcaaacctgatgatcctgctctctggtctctgctgtctcagctggtt
cctttctatgcaccacgaaaggccaaggcaggagctgtggcgggaaacattgcccaagta
cttgatgtaaaccgtggaaaggaagccctggtggacattgcagtgaaccagctggctgca
gggtgtcacatgtcagaagataagcagaacaaccctctgaagaacattcagaaggccatc
cacctctctccaggtaaccctgcggcctgggcagtgctgatggcagcctgccacgctgag
aacaccactgcccgcctgagctgtgctcggccaccgcgcactggtctggagatgactctg
ctagctgcagtctcagcccaaactgcagaaggagaccttccacagagttacatccagact
cttgaagactggtgtctgtgccaagctgttaccagtctggaggagactggtgaactttca
gcagctgaagctctgtgtaacaagggtttaaaaagccgccctgagcacccagctctgctt
ttgctgttgagacaagttcagtgcaagcagctgctgcagactcacagggaacttccagac
agcatcctgcaggagctccacaagacagtcatgaccacttcaacttcggttgcagcctgg
caatggctggcagaaacgtaccagtcccaaaggatgatgattggagcagagatgtgctac
aggaagagtctgcagctggcatcacagcagggcagctggcatgggaagttgtccagcctg
ctcaggctggctatgctggccctggaagtctgcatggctaacgtctcaggtgaccactgg
ccagccttggcacaggaggcaacagctgaggctctgaagctctctccttgccccctggca
tctctcctgcaggcactactgcagtatcagcgcaacatggcagcaagggagactcgccgg
atgttggacagagtggtacaccagccagggaatccagagagcatcgtgtcagtggcacgc
tggtacctgctgcaccatctgcatgccaaagaagatcctgaattcatagatgtgctcata
gacaatgccaaagccaatggagacgtgcgactgctggagctgcacgagaagctgtcagca
agcacctag
DBGET
integrated database retrieval system
