Pseudomonas sp. UW4: PputUW4_01266
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Entry
PputUW4_01266 CDS
T02357
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PputUW4_01266 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuu03400
]
PputUW4_01266 (ung)
Enzymes [BR:
ppuu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PputUW4_01266 (ung)
DNA repair and recombination proteins [BR:
ppuu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PputUW4_01266 (ung)
Prokaryotic type
PputUW4_01266 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFY18472
UniProt:
K9NFV6
LinkDB
All DBs
Position
1481508..1482200
Genome browser
AA seq
230 aa
AA seq
DB search
MTADDRIKLEPGWKEALRAEFDQPYMAELRNFLQQERAAGKEIYPPGPMIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMLNTTMTVERANANAHKDKGWQFFTDRVIEVVSQQQPHLVFMLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGETPIEWRLPPV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgacgaccgtatcaaactcgaaccgggctggaaggaggcactgcgtgccgaa
ttcgaccagccttacatggcagagttgcgaaacttcctgcaacaggaacgggcggccggc
aaggagatctatccgccggggccgatgattttcaacgcgctcaattccacgccgctggac
aaggtcaaggtggtgatcctcggtcaggatccctatcacggcccgggccaggcccacggt
ttgtgcttctcggtgcaacctggcgtaccggcgccaccgtcgctggtgaacatctataaa
gagctcaagcgcgacctgaacatcgacatccccaaccatggctacctgcagagctgggcc
gatcagggcgtgctgatgctcaacaccaccatgaccgtcgaacgcgccaacgccaatgcc
cacaaggacaagggctggcagtttttcaccgatcgggtcattgaagtggtcagccagcag
cagccgcacctggtgttcatgctgtggggcgcccatgcccagagcaagcagaagctgatc
gatgcgaccaagcacctggtgctgacctcggtgcacccgtcaccgctgtccgcctatcgc
ggcttcctcggttgcgggcatttcagccggaccaacaagtttctggagcagaatggcgag
acgccgatcgagtggcggttgccgccggtttga
DBGET
integrated database retrieval system
