Pseudomonas sp. UW4: PputUW4_05009
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Entry
PputUW4_05009 CDS
T02357
Symbol
soxA
Name
(GenBank) sarcosine oxidase, alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00260
Glycine, serine and threonine metabolism
ppuu01100
Metabolic pathways
Module
ppuu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PputUW4_05009 (soxA)
Enzymes [BR:
ppuu01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PputUW4_05009 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PputUW4_05009 (soxA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
DAO
NAD_binding_8
HI0933_like
Pyr_redox_3
GIDA
FAD_binding_3
Pyr_redox
Thi4
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AFY22199
LinkDB
All DBs
Position
complement(5718871..5721888)
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AA seq
1005 aa
AA seq
DB search
MSQINRLSNGGRIDRNKVLSFTFNGQNYKGFEGDSLAAALLANGVDIIGRSFKYSRPRGI
FAAGAEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPSVNNDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDTYDYMNQHCDVLIVGAGP
AGLAAALAAARSGARVILADEQEEFGGSLLDSRESLDGKPAMEWVASVIDELKNTPDVLL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRQRIHRVRAKRVVLATGAHERPLVYG
NNDVPGNMLAGAISTYVRRYGVAPGKKLVLSTNNDHAYRVALDWLDASLQVVAIADARSN
PRGALVEEARAKGIRILTGSAVIEARGSKRVTAARVAAIDVKAHAVTSPGEWLECDVVAS
SGGYSPVVHLASHLGGKPIWREDILGFVPGEAPQKRVCVGGINGVYGLGDSLADGFEGGA
RAAAEAGFQTIEGVLPKALSRLEEPTLALFQVPHEKNTARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVTIPQMGTTMFRPNYTPVTF
GAVAGRHCGHIFEPVRYTALHQWHLKNGAEFEDVGQWKRPWYFPKSGEDLHAAVKRECKA
VRDSVGLLDASTLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFVMTTTTGGAARVLQWLELYHQTEWPDMKVYFTSVTDHWATMTLSGPNSRKL
LSEVTDIDLSSEAFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLEKIVD
AGKKYNLTPYGTETMHVLRAEKGFIIVGQDTDSSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVRDQRKQLVGLKPIDPTKWLPEGAQLVFNTKQAIPMTMVGHVTSSYLHNSLGYSF
AMGVVKGGLQRMGERVFAPLADGSVIEAEIVSSVFFDPKGERQNV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcaatcgcctgtccaatggcggacggatcgaccgcaacaaagtcttgagc
ttcaccttcaacggccagaactacaaaggcttcgaaggcgactccctggccgctgcactg
ctggccaacggcgtcgacatcatcggtcgcagcttcaagtattcccgtccgcgcggcatc
ttcgccgccggtgccgaagagccgaacgcggtgctgcagatcggcgccaccgaagccacg
cagatcccgaacgtgcgcgccacgcaacaggcgctgtatcaaggcctggtcgccaccagc
accaatggctggccgagcgtgaacaacgacatgatggggattctcggcaaggtcggcggc
aagctgatgccgccgggtttctactacaaaaccttcatgtacccgcaatcgttctggatg
acttacgagaagtacatccgcaaggctgccggcctgggccgctcgccgaccgagaacgat
ccggacacctacgactacatgaaccagcactgtgacgtgctgatcgtcggtgctggccct
gccggcctggcggctgcactggcggctgcgcgcagcggcgcccgtgtaattctggctgac
gaacaggaagagttcggcggcagcctgctcgactcccgcgaaagcctcgacggcaaaccg
gcgatggagtgggtcgccagcgtcatcgacgaactgaagaacactccggacgtgctgctg
ttgccgcgcgccaccgtcaatggctatcacgaccacaacttcctgaccattcacgagcgc
ctgaccgatcacctcggcgaccgcgcaccgattggccaggtgcgtcagcgtattcaccgg
gttcgtgccaagcgtgtggtgctggcgaccggcgctcacgagcgtccactggtctacggc
aacaacgacgtgccgggcaacatgctcgccggcgccatctcgacctacgtgcgtcgttac
ggtgtggcaccgggcaagaaactggtgctgtcgaccaacaacgaccacgcctaccgcgtt
gccctggattggctcgacgccagcctgcaagtggtggccatcgccgatgcccgcagcaac
ccgcgtggtgcgctggtggaagaggcgcgtgccaaaggcatccgcattctcaccggcagc
gccgtgatcgaggcccgtggcagcaagcgcgtgaccgctgcccgtgtggccgccatcgac
gtcaaagcccatgccgtgaccagtcctggcgaatggcttgaatgcgacgtggtggccagt
tccggtggttacagcccggtggttcacctggcttcgcacctgggtggcaagccgatctgg
cgcgaagacatcctcggtttcgtaccgggtgaagcaccgcagaagcgtgtttgcgtcggt
ggcatcaacggtgtctacggccttggcgattctctggctgacggttttgaaggtggcgcc
cgcgccgctgccgaagccgggttccagacgattgaaggtgtgttgccaaaagccctgagc
cgtctcgaagaaccgaccctggcgctgttccaggtgccccatgaaaagaacaccgcacgt
gcgccgaagcaattcgtcgacctgcaaaacgacgtcaccgccgccgccatcgaactggcg
acccgcgaaggcttcgagtcggtcgagcacgtcaagcgctacaccgcactgggcttcggc
accgatcagggcaagctcggcaacgtcaacggcctggccatcgccgcccgttcgctgaac
gtgaccatcccgcagatgggcaccaccatgttccgtccgaactacacgccggtgactttc
ggcgccgtggccggtcgtcactgtgggcacatcttcgagccggtgcgttacaccgcgctg
catcaatggcacctgaaaaacggcgccgagttcgaagacgtcggccagtggaaacgtcct
tggtacttcccgaaatccggtgaagacctgcacgccgcggtcaagcgcgaatgcaaagcc
gtgcgcgacagcgtcggcctgctcgatgcttcgaccctgggcaagatcgatatccagggc
ccggatgcgcgcgagttcctcaaccgcgtctacaccaacgcctggaccaagctcgatgtg
ggcaaggcgcgctacggcctgatgtgcaaagaagacggcatggtgttcgacgacggcgtg
acggcttgcctggccgacaaccacttcgtcatgaccaccaccaccggcggcgcggctcgt
gtgctgcagtggctggagctgtaccaccagaccgaatggccggacatgaaggtgtacttc
acctccgtgaccgaccactgggcaaccatgaccctgtccgggccgaacagccgcaagctg
ctcagcgaagtcaccgacatcgacctgagcagcgaagccttcccgttcatgacctggaaa
gaaggcctggtcggcggtgtgccggcgcgggtgttccggatttcgtttaccggtgaactg
tcgtacgaagtcaacgtgcaagccgactatgcgatgggtgtgctggaaaaaatcgtcgat
gctggcaagaagtacaacctgaccccgtacggcaccgaaaccatgcacgtgctgcgggcc
gagaagggtttcatcatcgtcggccaggacactgacagctcgatgaccccggacgacctg
aacatgggctggtgtgtcggtcgcaccaaaccgttctcgtggatcggctggcgtggcatg
aaccgtgaagactgtgtgcgtgatcagcgcaaacagctggttggcctgaagccgatcgat
ccgaccaaatggctgccggaaggtgcgcaactggtgttcaacaccaagcaagccatcccg
atgaccatggtgggtcacgtgacttccagttacctgcacaactccctgggctattcgttt
gccatgggcgtggtcaagggcgggttgcagcggatgggcgagcgagtgttcgcaccgctg
gccgatggcagcgtgatcgaggcggaaatcgtttcttcggtgttcttcgatccgaagggt
gaacgccagaacgtttaa
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