Pseudomonas putida DOT-T1E: T1E_0872
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Entry
T1E_0872 CDS
T02181
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx03030
DNA replication
ppx03430
Mismatch repair
ppx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T1E_0872 (dnaN)
03430 Mismatch repair
T1E_0872 (dnaN)
03440 Homologous recombination
T1E_0872 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppx03032
]
T1E_0872 (dnaN)
03400 DNA repair and recombination proteins [BR:
ppx03400
]
T1E_0872 (dnaN)
Enzymes [BR:
ppx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T1E_0872 (dnaN)
DNA replication proteins [BR:
ppx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T1E_0872 (dnaN)
DNA repair and recombination proteins [BR:
ppx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T1E_0872 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AFO46730
UniProt:
I7AVQ6
LinkDB
All DBs
Position
993606..994709
Genome browser
AA seq
367 aa
AA seq
DB search
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE
EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLLVKAGRSRFTLSTLPANDFPTVE
EGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRNTLRAVSTDGHRLALC
SMSAPIEQEDRHQVIVPRKGILELARLLTDPEGMVSIVLGQHHIRATTGEFTFTSKLVDG
KFPDYERVLPKGGDKLVVGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQANNPEQ
EEAEEEISVDYEGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQEAGNDDSSY
VVMPMRL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaccattcaacgcgaagccctgttgaaacccctgcaactggtcgccggtgtc
gtcgagcgccgtcagaccttgccggtcctgtccaacgtattgctggtcgtacaaggccag
caactgtcgttgaccggtaccgacctggaagtcgagctggtaggccgcgtgcaactggaa
gagccggccgagcctggcgagatcactgttccggcgcgcaagctgatggacatctgcaaa
agcctgcctaacgacgccctgatcgatatcaaggtcgatgagcagaaattgttggtaaag
gccggccgcagccgcttcaccctgtcgaccctgcctgccaatgacttcccgactgtggaa
gaaggcccgggttcgctgacctgcaacctggagcagagcaagctgcgccgcctgatcgag
cgaaccagcttcgccatggcccagcaggatgtgcgctattacctcaacggcatgctgctt
gaggtttcccgcaacacgttgcgggccgtatccaccgacggtcaccgcctggcgctttgc
tcgatgagcgcgccgatcgagcaggaggatcgacaccaggtcatcgtgccgcgtaaaggt
atcctggagttggcgcgcctgctgaccgatcctgaaggtatggtcagcatcgtgctgggc
cagcatcacatccgcgccactactggcgagttcacctttacctccaagctggtggacggc
aagttcccggactacgagcgcgtactgcccaaaggcggtgacaagctggttgtcggagac
cgccaggcgctgcgtgaagctttcagccgtactgcgattctttccaacgaaaagtaccgc
ggtattcgcctgcaactggctgccggtcaactgaagatccaggctaacaaccctgagcag
gaagaagctgaagaagaaatcagcgtggactacgaaggtagctcgctggagattggtttc
aacgtcagctacttgctggacgtgctgggcgtgatgactactgagcaagttcgtctgatc
ttgtccgattcaaacagcagtgcgctgctgcaggaagctggcaatgacgattcttcctac
gttgtcatgccgatgcgcctgtaa
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