Pseudomonas putida DOT-T1E: T1E_5620
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Entry
T1E_5620 CDS
T02181
Name
(GenBank) Ku family containing protein
KO
K10979
DNA end-binding protein Ku
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
T1E_5620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppx03400
]
T1E_5620
DNA repair and recombination proteins [BR:
ppx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
T1E_5620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Tom5
Motif
Other DBs
NCBI-ProteinID:
AFO51441
UniProt:
I7CDZ8
LinkDB
All DBs
Position
complement(6121468..6122289)
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AA seq
273 aa
AA seq
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MARAIWKGAISFGLVHIPVALNTAVRTERVDFDWLDKRSMEPVGYKRVNKVTGKEIDKDN
IVKGVEFEKGRYVVISEEEIRKARPEATQTIDIFSFVEAGDIPLQHFDTPYYLTPDRRGG
KVYALLRETLEKTGKVALATVVLHTRQHLALLRPLNQALVMITLRWPEEVRGLETLELDA
SVTDSKVEKRELEMAKRLVEDMSGPWKPEDYHDAFRQTIMDLVEEKASKGKIEAVEKGDA
GGAEKGADILDLTELLKRSLGGKKPVKKTRKAS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggcaatctggaaaggcgccatcagttttggccttgtgcacatccccgtggca
ctcaataccgccgtgcgcaccgagcgtgtggacttcgactggctggacaaacgcagcatg
gagccggtcggctacaagcgggtgaacaaggtgaccggcaaggaaatcgacaaggacaat
atcgtcaagggcgtagagttcgagaagggccgctatgtggtgatcagtgaggaggagatc
cgcaaggcccggcccgaagcgacccagacgatcgatatcttttcctttgtggaagcgggc
gatattccgctgcagcatttcgatacgccgtactacctgaccccggaccgccgtggcggc
aaggtgtacgccttgctgcgcgagacgctggaaaagaccggcaaggtggcactggccacc
gtggtattgcatacccggcagcacttggcgctgctgcggccgctgaaccaggcgctggtg
atgatcaccttgcgctggcctgaagaggtgcgcgggctggaaacgctggagctggatgcc
agcgtgaccgacagcaaggtggagaagcgtgagctggagatggccaagcgcctggtagag
gacatgagcgggccctggaagcctgaggattatcacgacgccttccgccagacaatcatg
gacctggtggaagagaaggccagcaagggcaagatcgaggcggtggagaagggcgacgca
ggaggggccgagaaaggtgcggacatcctcgacctgaccgaactgctcaagcgcagcctg
ggtggcaagaaaccggtgaagaagacgcgaaaggcctcatga
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