Paenibacillus polymyxa E681: PPE_04131
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Entry
PPE_04131 CDS
T01319
Name
(GenBank) RNA polymerase sigma70
KO
K05346
deoxyribonucleoside regulator
Organism
ppy
Paenibacillus polymyxa E681
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppy03000
]
PPE_04131
Transcription factors [BR:
ppy03000
]
Prokaryotic type
Other transcription factors
Others
PPE_04131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
MarR_2
HTH_Crp_2
Sigma70_r4_2
HTH_24
Sigma70_r4
HTH_23
HTH_IclR
HTH_3
DUF134
HTH_Tnp_4
HTH_28
Terminase_5
HTH_38
Crp
Fe_dep_repress
HTH_36
HVO_A0261_N
MarR
LacI
HTH_11
HTH_31
DUF7343
UPF0122
HTH_37
HTH_10
DeoRC
HTH_29
HTH_5
TrmB
GntR
wHTH-PRTase_assc
HTH_17
KORA
Motif
Other DBs
NCBI-ProteinID:
ADM71911
LinkDB
All DBs
Position
complement(4482839..4483774)
Genome browser
AA seq
311 aa
AA seq
DB search
MDHEKQRLSIEAARLYYLNDYSQQDIAVRLGVSRPTVSRLLQAAKEQGYVRISIVDPMED
MDALGEQVKKKYGLDNVLVCYSPLNEYQEIKKHISKKAADYLHETVQDADIIGVTWGTTM
HAVALHLQQKQVKGVEVVQLKGGVSHSHVNTYAVETVNLFAEAFHTIARYLPLPVIFDSH
AVKKMVEEDRHIQRIIELGKQANIAVFTVGTVKEDALLFRLGYFNGEEQKLLQRIGKGDI
CSRFFDAEGNICSQEINSRTVGIDLPDLRKKEKSILVAGGQRKVEAIRASLRGKYANILV
TDQFTAQALLQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgaaaagcagcgattaagtatcgaggcagccagattatactatctaaacgac
tacagtcagcaagatatcgcggtcagactcggggtttcgcgtcctactgtatcgcggtta
cttcaggctgccaaggaacagggatacgtgcggattagtattgtggacccgatggaggat
atggacgcgctcggagagcaggtgaagaagaaatacggactggataacgtgttagtctgt
tattcgccgttaaatgaatatcaggagatcaagaagcatattagcaaaaaagcagccgat
tatttgcatgaaacggtacaggatgctgatattattggagtgacatggggaacaacaatg
catgccgtggcgcttcatctccaacaaaagcaggtcaagggtgtcgaggtggttcagctc
aaaggaggcgtgagccattcacatgtcaacacatatgccgtggaaaccgtgaatttgttc
gcagaagcctttcataccatagcacggtatttaccgctgcctgtgatttttgacagtcac
gccgttaagaaaatggtcgaggaggatcggcatattcagcgtattattgaacttggcaag
caggcgaacatcgcggtctttacagtgggtacggtcaaggaggatgcgttgctgttccga
ttgggctattttaacggggaagagcagaagctactgcaaagaattggcaagggcgatatt
tgctcgcgcttttttgacgctgagggcaatatatgcagtcaggaaatcaatagtcgtacc
gtcgggattgatttgcctgatttgcgaaagaaggagaagtccattctcgtcgctggaggc
cagcgtaaagtggaggccattcgggcatcgctgcgtggcaagtatgcgaatatcttggtg
acggatcagtttacggcacaagcacttttacaatag
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