Pongo pygmaeus (Bornean orangutan): 129020199
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Entry
129020199 CDS
T10128
Symbol
CACNA1A
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04010
MAPK signaling pathway
ppyg04020
Calcium signaling pathway
ppyg04721
Synaptic vesicle cycle
ppyg04723
Retrograde endocannabinoid signaling
ppyg04724
Glutamatergic synapse
ppyg04725
Cholinergic synapse
ppyg04726
Serotonergic synapse
ppyg04727
GABAergic synapse
ppyg04728
Dopaminergic synapse
ppyg04730
Long-term depression
ppyg04742
Taste transduction
ppyg04930
Type II diabetes mellitus
ppyg05017
Spinocerebellar ataxia
ppyg05032
Morphine addiction
ppyg05033
Nicotine addiction
ppyg05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129020199 (CACNA1A)
04020 Calcium signaling pathway
129020199 (CACNA1A)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
129020199 (CACNA1A)
04727 GABAergic synapse
129020199 (CACNA1A)
04725 Cholinergic synapse
129020199 (CACNA1A)
04728 Dopaminergic synapse
129020199 (CACNA1A)
04726 Serotonergic synapse
129020199 (CACNA1A)
04730 Long-term depression
129020199 (CACNA1A)
04723 Retrograde endocannabinoid signaling
129020199 (CACNA1A)
04721 Synaptic vesicle cycle
129020199 (CACNA1A)
09157 Sensory system
04742 Taste transduction
129020199 (CACNA1A)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
129020199 (CACNA1A)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
129020199 (CACNA1A)
09165 Substance dependence
05032 Morphine addiction
129020199 (CACNA1A)
05033 Nicotine addiction
129020199 (CACNA1A)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
129020199 (CACNA1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppyg04040
]
129020199 (CACNA1A)
Ion channels [BR:
ppyg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129020199 (CACNA1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
129020199
NCBI-ProteinID:
XP_054320194
LinkDB
All DBs
Position
20:complement(13449750..13750438)
Genome browser
AA seq
2504 aa
AA seq
DB search
MARFGDEMPARYGGGGSGAATGVVVGAGGGRGAGGSRQGGQPGAQRMYKQSMAQRARTMA
LYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQH
LPDDDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTG
ILATVGTEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIF
AIIGLEFYMGKFHTTCFEEGTDDIQGESPAPCGTEEPARTCPNGTKCQPYWEGPNNGITQ
FDNILFAVLTVFQCITMEGWTDLLYNSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLS
GEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDETDGEQRHPFDAL
RRTTIKKSKTDLLNPEEAEDQLADIASVGSPFARASIKSAKLENSTFFHKKERRMRFYIR
RMVKTQAFYWTVLSLVALNTLCVAIVHYNQPEWLSDFLYYAEFIFLGLFMSEMFIKMYGL
GTRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPGTSFGISVLRALRLLRIFKVTKYWASLR
NLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDEGTPPTNFDTFPAAIMTV
FQILTGEDWNEVMYDGIKSQGGVQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQ
ELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSIAVKEQQKNQKPAKSVWEQRTSE
MRKQNLLASREALYNEMDPDERWKAAYTRHLRPDMKTHLDRPLVVDPQENRNNNTNKSRA
AEPTVDQRLGQQRAEDFLRKQARYHDRARGPSGSAGLDARRPWAGSQEAELSREGPYGRE
SDHHAREGSLEQPGFWEGEAERGKAGDPHRRHVHRQGGSRESRSGSPRTGADGEPRRHRA
HRRPGEEGPEDKAERRARHREGSRPARGGEGEGEGPDGGERRRRHRHGAPATYEGDARRE
DKERRHRRRKENQGSGVPVSGPNLSTTRPIQQDLGRQDPPLAEDIDNMKNNKLATAESAG
PHDSLGHTGLPQSPAKMGNSTDPGPTPAIPAMATNPQNAASRRTPNNPGNPSNPGPPKTP
ENSLIVTNPSGTQTNSAKTARKPDHTTVDIPAACPPPLNHTVVQVNKNANPDPLPKKEEE
KKEEEEDDRGEDGPKPMPPYSSMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIAL
AAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVV
SGALVAFAFTGNSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNIL
IVYMLFMFIFAVVAVQLFKGKFFHCTDESKEFEKDCRGKYLLYEKNEVKARDREWKKYEF
HYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFENQGPSPGYRMEMSIFYVVYFVVFPFF
FVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNKQSFQYRMWQ
FVVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFG
ILNYFRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRIL
LWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDVEDEDSDEDEFQITEHNNFRT
FFQALMLLFRSATGEAWHNIMLSCLSGKPCDKNSGILTRECGNEFAYFYFVSFIFLCSFL
MLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAACGRIHYKDMYSLLRVISP
PLGLGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDA
ELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQ
DRTPLMFQRMEPPSPTQEGGPGQNALPSTQLDPGGALMAHESGLKESPSWVTQRAQEMFQ
KTGTWSPERVPPTDMPNSQPNCQSVEMREMGRDGYSDSEHYLPMEGQGRAASMPRLPAEN
QRRRGRPRGNNLSTISDTSPMKRSASVLGPKARRLDDYSLERVPPEENQRHHQRRRDRSH
RASERSLGRYTDVDTGLGTDLSMTTQSGDLPSKERDQERGRPKDRKHRQHHHHHHHHHPP
PPDKDRYAQERPDHGRARARDQRWSRSPSEGREHMAHRQGSSSVSGSPAPSTSGTSTPRR
GRRQLPQTPSTPRPHVSYSPVIRKAGGSGPPQQQQQQQQQQQQAVARPGRAATSGPRRYP
GPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRACRHGGARWPASGPHVSEGSP
GPRHHGYYRGSDYDEADGPGSGGGEEAMAGAYDAPPPARHASSGATGRSPRTPRASGLAC
ASPSRHGRRLPNGYYPAHGLARPRGPGSRKGLHEPYSESDDDWC
NT seq
7515 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcttcggagacgagatgccggcccgctacgggggaggaggctccggggcagcc
accggggtggtcgtgggcgccggaggcgggcgaggagccgggggcagccggcagggcggg
cagcccggggcgcaaaggatgtacaagcagtcaatggcgcagagagcgcggaccatggca
ctctacaaccccatccccgtccgacagaactgcctcacggttaaccggtctctcttcctc
ttcagcgaagacaacgtggtgagaaaatacgccaaaaagatcaccgaatggcctcccttt
gaatatatgattttagccaccatcatagcgaattgcatcgtcctcgcactggagcagcat
ctgcctgatgatgacaagacccctatgtctgaacggctggatgacacagaaccatacttc
attggaattttttgtttcgaggctggaattaaaatcattgcccttgggtttgccttccac
aaaggctcctacttgaggaatggctggaacgtcatggactttgtggtggtgctaacgggc
atcttggcgacagttgggacggagtttgacctacggacgctgagggcagttcgagtgctg
cggccgctcaagctggtgtctggaatcccaagtttacaagtcgtcctgaagtcgatcatg
aaggcgatgatccctttgctgcagatcggcctcctcctattttttgcaatccttattttt
gcaattatagggttagaattttatatgggaaaatttcataccacctgctttgaagagggg
acagatgacattcagggtgagtctccggctccatgtgggacagaagagcccgcccgcacc
tgccccaatgggaccaaatgtcagccctactgggaagggcccaacaatgggatcactcag
ttcgacaacatcctgtttgcagtgctgactgttttccagtgcataaccatggaagggtgg
actgatctcctctacaatagcaacgatgcctcagggaacacttggaactggttgtacttc
atccccctcatcatcatcggctccttttttatgctgaaccttgtgctgggtgtgctgtca
ggggagtttgccaaagaaagggaacgggtggagaaccggcgggcttttctgaagctgagg
cggcaacaacagattgaacgtgagctcaatgggtacatggagtggatctcaaaagcagaa
gaggtgatcctcgccgaggatgaaactgacggggagcagaggcatccctttgatgctctg
cggagaaccaccataaagaaaagcaagacagatttgctcaaccccgaagaggctgaggat
cagctggctgatatagcctctgtgggttctcccttcgcccgagccagcattaaaagtgcc
aagctggagaactcgaccttttttcacaaaaaggagaggaggatgcgtttctacatccgc
cgcatggtcaaaactcaggccttctactggactgtactcagtttggtagctctcaacacg
ctgtgtgttgctattgttcactacaaccagcccgagtggctctccgacttcctttactat
gcagaattcattttcttaggactctttatgtccgaaatgtttataaaaatgtacgggctt
gggacgcggccttacttccactcttccttcaactgctttgactgtggggttatcattggg
agcatcttcgaggttatctgggctgtcataaaacctggcacatcctttggaatcagcgtg
ttacgagccctcaggttattgcgtattttcaaagtcacaaagtactgggcatctctcaga
aacctggtcgtctctctcctcaactccatgaagtccatcatcagcctgttgtttctcctt
ttcctgttcattgttgtctttgcccttctgggaatgcaactcttcggcggccagtttaat
ttcgatgaagggactcctcccaccaacttcgatacttttccagcagcaataatgacggtg
tttcagatcctgacgggcgaagactggaacgaggtcatgtacgacgggatcaagtctcag
gggggcgtgcagggcggcatggtgttctccatctatttcattgtactgacgctcttcggg
aactacaccctcctgaatgtgttcttggccatcgctgtggacaatctggccaacgcccag
gagctcaccaaggacgagcaagaggaagaagaagcagccaaccagaaactcgccctacag
aaagccaaggaggtggcagaagtgagtcctctgtccgcggccaacatgtccatagctgtg
aaagagcaacagaagaatcaaaagccagccaagtccgtgtgggagcagcggaccagtgag
atgcgaaagcagaacttgctggccagccgggaggccctgtacaacgaaatggacccggac
gagcgctggaaggctgcctacactcggcacctgcggcccgacatgaagacgcacttggac
cggccgctggtggtggacccgcaggagaaccgcaacaacaacaccaacaagagccgggcg
gccgagcccaccgtggaccagcgcctcggccagcagcgtgccgaggacttcctcaggaaa
caggcccgctaccacgatcgggcccggggccccagcggctcggcgggcctggacgcacgg
aggccctgggcgggcagccaggaggccgagctgagccgggagggaccctacggccgcgag
tcggaccaccacgcccgggagggcagcctggagcagcccgggttctgggagggcgaggct
gagcgaggcaaggccggggacccccaccggaggcatgtgcaccggcaggggggcagcagg
gagagccgcagcgggtccccgcgcacgggcgcggacggggagccccgacgtcatcgtgcg
caccgcaggcccggggaggagggcccggaggacaaggcggagcggagggcgcggcaccgc
gagggcagccggccggcccggggaggcgagggcgagggcgagggccccgacggcggcgag
cgcaggaggcggcaccggcacggcgctccagccacgtacgaaggggacgcgcggagggag
gacaaggagcggaggcatcggaggaggaaagagaaccagggctccggggtccctgtgtcg
ggccccaacctgtcaaccacccggccaatccagcaggacctgggccgccaagacccaccc
ctggcagaggacattgacaacatgaagaacaacaagctggccaccgcggagtcggccggt
ccccacgacagcctcggccacaccggcctgccccagagcccagccaagatgggaaacagc
actgaccccggccccacgccggccatccctgccatggccaccaacccccagaacgctgcc
agccgccggacgcccaacaacccggggaacccgtccaatcccggcccccccaagaccccc
gagaatagccttatcgtcaccaaccccagcggcacccagaccaattcagctaagactgcc
aggaaacccgaccacaccacagtggacatccccgcagcctgcccaccccccctcaaccac
actgtcgtacaagtgaacaaaaacgccaacccagacccactgccaaaaaaagaggaagag
aagaaggaggaggaggaagacgaccgtggggaagacggccctaagccaatgcctccctat
agctccatgttcatcctgtccacgaccaacccccttcgccgcctgtgccattacatcctg
aacctgcgctactttgagatgtgcatcctcatggtcattgccatgagcagcatcgccctg
gccgccgaggaccctgtgcagcccaatgcacctcggaacaacgtgctgcgatattttgac
tacgtttttacaggcgtctttacctttgagatggtgatcaagatgattgacctggggctc
gtcctgcatcagggtgcctacttccgtgacctctggaatattctcgacttcatagtggtc
agtggggccctggtagcctttgccttcactggtaatagcaaaggaaaagacattaacacg
attaaatccctccgagtcctccgggtgctacgacctcttaaaaccatcaagcggctgcca
aagctcaaggctgtgtttgactgtgtggtgaactcgcttaaaaacgtcttcaacatcctc
atcgtctacatgctattcatgttcatcttcgccgtggtggctgtgcagctcttcaagggg
aaattcttccactgcactgacgagtctaaggagtttgagaaagattgtcgaggcaaatac
ctcctgtacgagaagaatgaggtgaaggcgcgagatcgggagtggaagaagtatgaattc
cactacgacaatgtgctgtgggctctgctgaccctcttcaccgtgtccacgggagaaggc
tggccacaggtcctcaagcactcagtggatgccacctttgagaaccagggccccagcccg
gggtaccgcatggagatgtccattttctacgtcgtctactttgtggtgttccccttcttc
tttgtcaatatctttgtggccttgatcatcatcaccttccaggagcaaggggacaagatg
atggaggaatacagcctggagaaaaatgagagggcctgcatcgatttcgccatcagcgcc
aagccactgacccgacacatgccgcagaacaagcagagcttccagtaccgtatgtggcag
ttcgtggtgtctccacctttcgagtacacgatcatggccatgatcgccctcaacaccatc
gtgctgatgatgaagttctatggggcttctgttgcttatgaaaatgccctgagggtgttc
aacatcgtcttcacctccctcttctccctggaatgtgtgctgaaagtcatggcttttggg
attctgaattatttccgcgatgcctggaacatcttcgactttgtgactgttctgggcagc
atcaccgatatcctcgtgactgagtttgggaataacttcatcaacctgagctttctccgc
ctcttccgagctgcccggctcatcaaacttctccgtcagggttacaccatccgcattctt
ctctggacctttgtgcagtccttcaaggccctgccttatgtctgtctgctgatcgccatg
ctcttcttcatctatgccatcattgggatgcaggtgtttggtaacattggcatcgacgtg
gaggacgaggacagtgatgaagatgagttccaaatcactgagcacaataacttccggacc
ttcttccaggccctcatgcttctcttccggagtgccaccggggaagcttggcacaacatc
atgctttcctgcctcagcgggaaaccgtgtgataagaactctggcatcctgactcgagag
tgtggcaatgaatttgcttatttttacttcgtttccttcatcttcctctgctcgtttctg
atgctgaatctctttgtcgctgtcatcatggacaactttgagtacctcacccgagactcc
tccatcctgggcccccaccacctggatgagtacgtgcgtgtctgggccgagtatgacccc
gcagcttgcggtcggattcattataaggatatgtacagtttattacgagtaatatctccc
cctctcggcttaggcaagaaatgtcctcatagggttgcttgcaagcggcttctgcggatg
gacctgcccgtcgcagatgacaacaccgtccacttcaattccacccttatggctctgatc
cgcacagccctggacatcaagattgccaagggaggagccgacaaacagcagatggacgct
gagctgcggaaggagatgatggcaatttggcccaatctgtcccagaagacgctagacctg
ctggtcacacctcacaagtccacagacctcaccgtggggaagatctacgcagccatgatg
atcatggagtactaccggcagagcaaggccaagaagctgcaggccatgcgcgaggagcag
gaccggacacccctcatgttccagcgcatggagcccccgtccccaacgcaggaaggggga
cctggccagaacgccctcccctccacccagctggacccaggaggagccctgatggctcac
gaaagcggcctcaaggagagcccgtcctgggtgacccagcgtgcccaggagatgttccag
aagacaggcacatggagcccggaacgagtcccccctaccgacatgcccaacagccagcct
aactgtcagtccgtggagatgcgagagatgggcagagatggctactccgacagcgagcac
tacctccccatggaaggccagggccgggctgcctccatgccccgcctgcctgcagagaac
cagaggagaaggggccggccacgtgggaataacctcagtaccatctcagacaccagcccc
atgaagcgttcagcctccgtgctgggccccaaggcccgacgcctggacgattactcgctg
gagcgggtcccgcccgaggagaaccagcggcaccaccagcggcgccgcgaccgcagccac
cgcgcctctgagcgctccttgggccgctacaccgacgtggacacaggcttggggacagac
ctgagcatgaccacccaatccggggacctgccgtcgaaggagcgggaccaggagcggggc
cggcccaaggatcggaagcatagacagcaccaccaccaccaccaccaccaccatcccccg
ccccccgacaaggaccgctatgcccaggaacggccggaccacggccgggcacgggctcgg
gaccagcgctggtcccgctcgcccagcgagggccgagagcacatggcgcaccggcagggc
agtagttccgtaagtggaagcccagccccctcaacatctggtaccagcactccgcggcgg
ggccgccgccagctcccccagaccccctccaccccccggccacacgtgtcctattcccct
gtgatccgtaaggccggcggctcggggcccccgcagcagcagcagcagcagcagcagcag
cagcagcaggcggtggccaggccgggccgggcggccaccagcggccctcggaggtaccca
ggccccacggccgagcctctggccggagatcggccgcccacggggggccacagcagcggt
cgctcgcccaggatggagcggcgggtcccaggcccggcccggagcgagtcccccagggcc
tgtcgtcacggcggggcccggtggccggcatctggcccgcacgtgtccgaggggtccccg
ggtccccggcaccatggctactaccggggctccgactacgacgaggccgatggcccgggc
agcgggggcggcgaggaggccatggccggggcctacgacgcgccaccccccgcacgacac
gcgtcctcgggcgccaccgggcgctcgcccaggactccccgggcctcgggcctggcctgc
gcctcgccttctcggcacggccggcgactccccaacggctactacccggcgcacggactg
gccaggccccgcgggccgggctccaggaagggcctgcacgaaccctacagcgagagtgac
gatgattggtgctaa
DBGET
integrated database retrieval system