Pongo pygmaeus (Bornean orangutan): 129024664
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Entry
129024664 CDS
T10128
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04151
PI3K-Akt signaling pathway
ppyg04382
Cornified envelope formation
ppyg04510
Focal adhesion
ppyg04512
ECM-receptor interaction
ppyg04518
Integrin signaling
ppyg04820
Cytoskeleton in muscle cells
ppyg04926
Relaxin signaling pathway
ppyg04933
AGE-RAGE signaling pathway in diabetic complications
ppyg04974
Protein digestion and absorption
ppyg05146
Amoebiasis
ppyg05165
Human papillomavirus infection
ppyg05200
Pathways in cancer
ppyg05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129024664 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129024664 (COL4A5)
04518 Integrin signaling
129024664 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129024664 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129024664 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
129024664 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
129024664 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
129024664 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129024664 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
129024664 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
129024664 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
129024664 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
129024664 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppyg04147
]
129024664 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
ppyg00536
]
129024664 (COL4A5)
Exosome [BR:
ppyg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129024664 (COL4A5)
Glycosaminoglycan binding proteins [BR:
ppyg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129024664 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129024664
NCBI-ProteinID:
XP_054327809
LinkDB
All DBs
Position
X:112607198..112869079
Genome browser
AA seq
1685 aa
AA seq
DB search
MKLRGVSLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGETGFPGLEGHRG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGDQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGN
IGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPG
PPGLDGQPGAPGLPGPPGPPGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGF
PGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKG
ERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGTLGPKGDRGFP
GPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHG
IPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGM
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPAGEKGSKGEPGLPGPPGPMDPNLL
GSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLT
GPPGLKGAIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPG
PKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPG
NPGLPGEPGPVGGGGRPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGLPGPEGSPGLPGNGAIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDSGPPGI
PGQPGLKGLPGLQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP
PGPDGLQGPPGPPGTSSIAHGFLITRHSQSTDAPQCPQGTLQVYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMQPLKGQSIQPF
ISRCAVCEAPAVVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgttcttactggccctgagtctttgg
gggcagcctgcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtgactgc
agtggcataaaaggggaaaagggagagacagggtttccaggtttggaaggacatcgagga
ttgcctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggtcctcctgggcttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
attcccggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggaccccctggtatcccaggtatgaagggtgaaccaggtagt
ataattatgtcatcactgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcctacctggtcccactggtataccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggacctaaggggaatatgggctta
aatttccagggacccaaaggtgaaaaaggtgagcaaggtcttcagggcccacctgggcca
cctgggcagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatacgtggtcctccaggtccc
ccaggtggtgagaaaggtgagaagggtgatcaaggagagccaggcaaaagaggtaaacca
ggcaaagatggagaaaatggccaaccaggaattcctggtttgcctggtgatcctggttac
cctggtgaacctggaagggatggtgaaaagggccaaaaaggtgacactggcccacctgga
cctcctggacttgtaattcctagacctgggactggtataactataggagaaaagggaaac
attgggttgcctggcttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ccacctggccttcctggacctccaggggctgcagttatgggtcctcctggccctcctgga
tttcctggagaaaggggtcagaaaggtgatgaaggaccacctggaatttccattcctgga
cctcctggacttgatggacagcctggggctcctgggcttccagggcctcctggccctcct
ggccctcacatccctcctagtgatgagatatgtgaaccaggccctccaggccccccagga
tctccaggtgataaaggactccaaggagaacaaggagtgaaaggtgacaaaggtgacact
tgcttcaactgcattggaactggtatttcagggcctccaggtcaacctggtttgccaggt
ctcccaggtcctccaggatctcttggtttccctggacagaaaggtgaaaaaggacaagct
ggtgcaactggtcccaaaggattaccaggcattccaggagctccaggtgctccaggcttt
cctggatctaaaggtgaacctggtgatatcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttcccctggagctccagggcttcctggtttacctggtactcctggacag
gatggattgccagggcttcctggcccgaaaggagagcctggtggaattacttttaagggt
gaaagaggtccccctgggaacccaggtttaccaggcctcccagggaatatagggcctatg
ggtccccctggtttcggccctccaggcccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggggatccaggtcagactataacc
cagccagggaagcctggcttgcctggtaacccaggcagagatggtgaagtaggtcttcca
ggtgaccctggactcccagggcaaccaggcttgccagggatacctggtagcaaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggctttcctggaatt
ccaggacctccaggagcacctgggacacctggaagaattggtctagaaggccctcctggg
ccacccggctttccaggaccaaagggtgaaccaggatttgcattacctgggccacctggg
ccaccaggacttccaggtttcaaaggaacacttggtccaaaaggtgatcgtggtttccca
ggacctccaggtcctccaggacgcactggcttagatgggctccctggaccaaaaggtgat
gttggaccaaatggacaacctggaccaatgggacctcctgggctgccaggaataggtgtt
cagggaccaccaggaccaccagggattcctgggccaataggtcaacctggtttacatgga
ataccaggagagaagggggatccaggacctcctggacttgatgttccaggtcccccaggt
gaaagaggcagtccagggatccccggagcacctggtcctataggacctccaggatcacca
gggcttccaggaaaagcaggtgcctctggatttccaggtaccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgtacctggt
cttaaaggtgatgatggcttgcagggtcagccaggacttcctggccctgcaggagaaaaa
ggtagtaaaggagagcctggccttccaggccctcctggaccaatggatccaaatcttctg
ggctcaaaaggagagaagggggaacctggcttaccaggtatacctggagtttcagggccg
aaaggttatcagggtttgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccaccaggtcccaaaggtaaccctggtctccctggacagccaggtcttaca
ggacctcctggacttaaaggagccatcggtgatatgggttttccagggcctcagggtgtg
gaagggcctcctggaccttctggagttcctggacaacctggctccccaggattacctgga
cagaaaggcgacaaaggtgatcctggtatttcaagcattggtcttccaggtcttcctggt
ccaaagggtgagcctggtctgcctggatacccagggaaccctggtatcaaaggttctgtg
ggagatcctggtttgcccggattaccaggaacccctggagcaaaaggacaaccaggcctt
cctggattcccaggaaccccaggccctcctggaccaaaaggtattagtggccctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtgggggtcgtcctgggcaacca
gggcctccaggcgaaaaaggcaaacctggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaaacccaggaccccctggacttccaggactt
tctggccaaaagggtgatggaggattacctgggattccaggaaatcctggccttccaggt
ccaaagggcgaaccaggctttcacggtttccctggtgtgcagggtcccccgggccctcct
ggttctccgggtccagctctggaaggacctaaaggcaaccctgggccccaaggtcctcct
gggagaccaggtctaccaggtccagaaggttctccgggtctccctggaaatggagctatt
aaaggagagaagggaaatccaggccaacctgggctacctggcttgcctggtttgaaagga
gatcaaggaccaccaggactccagggtaatcctggccggccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggattcccaggcatgaaaggacccagtggagta
cctggatcagctggccctgagggggaaccgggacttattggtcctccaggtcctcctgga
ttacctggtccttcaggacagagtatcataatcaaaggagattctggtcctccaggaatc
cctggccagcctgggttaaaaggtctaccaggactccaaggacctcaaggtttaccaggt
ccaactggccctccaggagatcctggacgcaatggactccctggctttgatggtgcagga
gggcgcaaaggagacccaggtctgccaggacagccaggtacccgtggtttggatggtccc
cccgggccagatggattgcaaggtcccccaggtccccctggaacctcctctattgcacat
ggatttcttattacacgccacagccagtcaacggatgcaccacaatgcccgcagggaaca
cttcaggtctatgaaggcttttctctcctgtatgtacaaggaaataaaagagcccacggt
caagacttggggacggctggcagctgccttcgtcgctttagtaccatgcctttcatgttc
tgcaacatcaataatgtttgcaactttgcttcaagaaatgactattcttactggctctct
accccagagcccatgccaatgagcatgcaacccctaaagggccagagcatccagccattc
attagtcgatgtgcagtatgtgaagctccagctgtggtgatcgcagttcacagtcagacg
atccagattccccattgtcctcagggatgggattctctgtggattggttattccttcatg
atgcatacaagtgcaggggcagaaggctcaggtcaagccctagcctcccctggttcctgc
ttggaagagtttcgttcagctcccttcatcgaatgtcatgggaggggtacctgtaactac
tatgccaactcctacagcttttggctggcaactgtagatgtgtcagacatgttcagtaaa
cctcagtcagaaacgctgaaagcaggagacttgaggacacgaattagccgatgtcaagtg
tgcatgaagaggacataa
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