Pongo pygmaeus (Bornean orangutan): 129031259
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Entry
129031259 CDS
T10128
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129031259 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppyg01007
]
129031259 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppyg03016
]
129031259 (FARSB)
Enzymes [BR:
ppyg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
129031259 (FARSB)
Amino acid related enzymes [BR:
ppyg01007
]
Aminoacyl-tRNA synthetase
Class II (U)
129031259 (FARSB)
Transfer RNA biogenesis [BR:
ppyg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129031259 (FARSB)
Prokaryotic type
129031259 (FARSB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
129031259
NCBI-ProteinID:
XP_054333303
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All DBs
Position
11:complement(123085637..123169174)
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AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPF
AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSD
IKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGD
HSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFP
ELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIH
ACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQ
EDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI
VIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVLPGEDKGGYVIKASEG
PAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIGPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgtgaagcgtgatctgctcttccaagccctgggccgcacctacact
gacgaagaatttgatgaactatgttttgaatttggtctggagcttgatgaaattacatct
gagaaggaaataataagtaaagaacaaggtaatgtaaaggcagcaggagcctctgatgtt
gttctttacaaaattgatgtccctgccaatagatatgatctcctgtgtctggaaggattg
gttcgaggacttcaggtcttcaaagaaaggataaaggctccagtgtataaacgggtaatg
cctgatggaaaaatccagaaattgattatcacagaagagacagctaagatacgtcctttt
gcggtagcagcagttctccgtaatataaagtttactaaagatcgatatgacagcttcatt
gaacttcaggagaaattacatcagaatatttgcaggaaaagagcactggttgccattggt
acccatgatttggacactttgtcaggcccatttacttatactgcaaagcgtccttcagat
atcaaattcaagcctctaaataagaccaaggagtatacagcctgtgaactgatgaacata
tacaagactgacaatcacctgaaacattatttacatatcattgaaaacaaacccctgtat
ccagttatctatgatagcaatggtgtcgtcctttcaatgcctcccatcatcaatggggat
cattccagaataacagtaaatactagaaatatttttattgaatgcacaggaactgacttt
actaaggcaaaaatagttcttgatattattgtcaccatgttcagtgaatattgtgagaat
caatttacggtcgaagctgctgaagtggtttttcctaatggaaaatcacatacctttcca
gaattagcttaccgaaaggagatggtgagagctgacctaattaacaaaaaagttggaatc
agagaaactccagaaaatcttgccaaacttctgaccaggatgtatttaaaatcagaagtc
ataggtgatgggaatcagattgagattgaaatccctccaaccagagctgacattatccat
gcatgtgatattgtagaagatgcagctattgcttatggatataacaacattcagatgact
ctcccgaaaacttacaccatagctaatcaatttcctcttaataagctcactgaacttctc
agacatgacatggcagccgctggcttcactgaagcacttacctttgccctgtgctcccaa
gaagatattgctgataaacttggtgtggatatctctgcaacaaaggcagtccacataagt
aatcctaaaacagctgaatttcaggtggcacgcactacccttcttcctggcctcctgaag
accatagcagcaaatcgtaagatgccccttccactgaaactgtttgaaatctctgacatt
gtaataaaagattctaatacagatgtaggtgcaaaaaactacaggcatctctgtgcggtt
tattacaacaagaatcctgggtttgagatcattcatgggctgctggacagaattatgcag
ttgctcgatgtgcttcctggtgaagacaaggggggatatgtgatcaaagcatcagaaggg
cctgctttcttccccgggcgatgtgcagagatctttgccaggggtcaaagcgtcgggaag
cttggggtccttcatcctgacgttatcaccaaatttgagctgaccatgccctgctcctcc
ctagaaatcaatattggaccctttttgtga
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