Photinus pyralis (common eastern firefly): 116160263
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Entry
116160263 CDS
T07438
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116160263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116160263
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
116160263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_CcmH_CycH
TPR_8
TPR_16
TPR_14
TPR_12
TPR_17
TPR_11
TPR_7
ANAPC3
ARM_TT21
ARM_TT21_C
BTAD
TPR_9
DUF6584
DUF7017
TcdB_N
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
116160263
NCBI-ProteinID:
XP_031329287
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MSSKEIKSLLKEAREAISKKDFKLSLELCKKILSLDRENYMALVFVGLSLQELGLNDKVI
PTFKKAIQISPKNALAFNGLANYLEKLQTDEAQAELISIYVTILNLESDDKKLNEVCEKL
GALSISDNHFTDVLEALQKVVSNESVTSATLASASVALANLISKRSNATQSVLDVYEAAL
KVVLSNEHLITRQYYSEYVKTLYKNKRYSALFKVGKEMFNLYNTDLSSIKWMCQAYTELA
IEQNDMCKEQNEIEKYCDILLNLEASSSVGLGTKALFLYENKNFLAAVDLLKQVTYSRPD
WSHMWVLLGLCYLDLHMYNNASRTSLTAQQQCNDHSSMALTKQLDKLLPQVLSRSTEDEY
LEKGVNFCLDKLKNAANVATIYIPLIRCYINLENFTQANLFLSKLKDMSNEPAMFTLLNA
QLLHKQKHHQDALDLLLKEDNNDISEWWYEIGTLYWDLTLFDKSLIPFLKAAKLDPNCYI
YFLHLGHYYQKFNDVDKARRCYEKACAMNDKCIEAVVELTKIYRSQKNWDANATLLQNLT
GSALNTENKWAWLQLGLNFLEQEDYTNATDTLRCVVRANPNDSYCWESLADAYMARGAYT
SALKSYQKATEIQPKSLYPLLQVANIKKKLGDFVEAHCDYESILRSNKHYVPALKGLAET
CIMQARQFTRDQRLGIARDYAEKALDMVTVGIRQQNDLCCLWKLAGDSCVLIAKLPDKYC
CALALKALAEGCASEENVVLEREELLLLAERCYHKALSMMDVQTMLWYDLASCFVLHAHY
SDDKDKAEKYYSKAADILEHCVCTEASCWQFWNLIGVIAFKRDKKDYALAQHALIKAVTA
DDGSAVAWCNLGTLYLVLEEPKLANEAFSQAQRADPNYVNSWIGQALIAESMVMDDAMDL
FRHSTQLGFHVEGAIGYANWVCQTLQNMKPRVELYSIHNMHAIPVACDAMTWYTETFTDD
PCGWNMLGLLKGRMGLNSEATLAFRNALRLSRKQTRDKVAINYGHILFKSRNYKEAIKMF
NNVEEATFNSGSGLALSLFKDEQYEESYEKYDQALHWLTEEEGHQSDLLVALASIVYMFQ
GPDPAKTLLFQSTELSPPSSYGFYATLSLGLLHGDPNLANLVLKELHKMRDVPQCLPHYA
TLVCHTYVLQGQHETAIREVSKLIHRHPNQASLWLTLSILLIRSYSKRSQSIAAAARCAQ
QAVKLGRGHIDVKKVLCIASLASFIAGDHQQALKSAQKAIHCYPDVAECWAVFIQSVMVL
QNKKSTFSHKEWLQKCVRHFKENLESSKLLSTWLDKIIVPKMMNMR
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaaggaaatcaaatcattgctcaaagaagcgcgtgaggcaatcagtaaaaag
gatttcaaactgtctttagaactatgcaagaaaattttgagcttggaccgggagaattat
atggctctggtctttgtgggattatcactacaagaactcggcttaaacgataaagttatc
ccaacgttcaaaaaggcaattcaaatatctccgaagaatgcactagcttttaatggctta
gcaaattatttagaaaaattgcaaactgacgaagctcaagcggaactaatttccatttat
gttaccatactgaacttggaaagcgatgataagaaattgaatgaagtttgtgaaaaactg
ggggcgctatccatttctgacaatcactttaccgatgtgttggaagctttgcagaaagtt
gttagcaatgaaagtgttacaagtgctaccctagcaagtgcatcggttgctcttgcaaat
cttatttctaaaagaagcaatgcaactcaatcagtgttggatgtgtatgaagcagcttta
aaagtagtgctgagcaatgaacatcttataacaagacagtactattcagagtatgtaaaa
acactgtataaaaataagcgatacagtgcgctttttaaagtaggcaaggaaatgtttaac
ttgtataacacagatctaagttctatcaaatggatgtgccaggcttacaccgagctagca
attgagcagaatgatatgtgtaaggaacagaatgaaattgaaaaatattgcgatattctc
ttgaatctggaagcaagctcttctgtcggattaggaactaaagctttatttttgtatgaa
aataaaaatttcttagcagcggttgatttactgaagcaagttacatactcaagaccggat
tggtcacatatgtgggtacttttgggtttgtgttacttggacttgcatatgtacaacaac
gccagcaggacaagtcttactgcacaacaacagtgcaatgaccactcaagtatggcatta
actaaacaattagataaactgcttccacaagtgctatccagatctactgaagacgaatat
ctggagaaaggagtcaatttttgtcttgataaattgaaaaacgctgcgaatgtggcgacc
atttacataccattaatccggtgttatataaacttagaaaattttactcaagcaaatttg
tttctttccaaactaaaagatatgtcaaacgagcccgcgatgtttactttgcttaatgct
caattgctacataaacaaaagcatcaccaggatgcactggatctgttattaaaggaagat
aataatgatatttcagaatggtggtatgaaattggaactctctactgggatctgacgtta
tttgataaaagtttgataccttttttgaaagctgcgaaacttgatcctaactgttacata
tactttttacatctcggccactactaccaaaagtttaatgatgtggacaaagcaagacgt
tgttacgaaaaggcgtgcgcaatgaatgacaagtgcattgaggccgtcgtggaacttact
aaaatttataggtctcaaaagaattgggatgcaaacgctaccttattacaaaatttaacc
ggtagtgccctcaatactgaaaataaatgggcttggctgcagttgggcttaaatttcttg
gagcaagaagattatacaaatgccaccgacacattgagatgtgttgtacgtgcgaatcca
aatgatagctactgttgggaaagtttggccgacgcgtatatggcgagaggtgcttatact
tcagctttaaaatcgtaccaaaaggctaccgagattcaaccgaaatcactgtatccacta
ttgcaagttgccaacataaaaaagaaactaggcgactttgtcgaagcccactgtgattat
gagtcaattcttcgaagtaataagcattacgtgcctgcattgaaaggcttagccgagact
tgcataatgcaagctaggcaatttacaagagatcagcggttgggaattgcgcgagactac
gctgagaaggcattggatatggttacagttggaattcgccaacagaatgatttgtgttgc
ctttggaaattggctggtgacagttgtgttttgattgcgaagttaccagataagtactgt
tgcgctttagccttaaaggcgctggctgaaggatgcgcgtcagaagaaaatgttgtttta
gaacgcgaggagttgcttttattagccgagcgttgttatcataaagctctgtcgatgatg
gatgttcaaacgatgctttggtatgatttggcgtcgtgctttgtgttacatgcgcattat
tctgatgataaagacaaagcagagaaatattattccaaggcggcagatatcttggaacat
tgtgtctgtacagaagcttcatgttggcaattttggaatttaattggcgttatagctttt
aaaagagataaaaaagattatgcgttggctcaacatgcacttataaaggcagttactgca
gatgatggcagtgcggtggcttggtgtaatttaggaactttatatttggttttggaagaa
ccaaaactggccaatgaagcattttcacaagcacaacgtgcagaccctaattacgtgaac
agttggattggacaggctttgatagctgagagtatggttatggatgacgctatggaccta
tttagacacagtacacaattaggatttcacgtggaaggtgctattggttatgcaaattgg
gtttgtcaaacacttcagaatatgaagccgcgtgttgaactctattctattcataatatg
catgccattcctgttgcctgtgatgctatgacttggtatacagaaacattcacggatgat
ccttgtggttggaatatgttaggattattaaaaggtcgcatgggattaaattcggaagca
actttggcatttcgaaatgccctacgactcagtagaaagcagacaagagataaagttgcc
attaattatgggcacatactttttaagtctcgtaactacaaggaagcaattaaaatgttt
aataacgtcgaagaggcgacgtttaatagcggaagtggtttggctctttctttgtttaaa
gatgagcaatacgaggaatcgtacgaaaaatatgatcaggctttgcattggttaactgag
gaggagggtcaccagtcggatttattggtcgccttagcttcaattgtttacatgtttcag
ggtcccgatccggcgaaaacgctcttatttcaaagcactgaattgagtccaccatcttca
tatgggttttatgctaccttatcattaggcttattacatggcgatccaaacttggccaat
cttgttcttaaggaattacacaagatgcgtgatgttccacagtgcctgccccactatgcg
accctggtttgccacacatatgtgttacaaggccagcatgaaaccgcaattagagaagta
tccaagctaatccatagacatccaaatcaagcatctttatggttgacactttccatttta
ttgatacgttcgtattctaaacgttcccaatccatagcagccgcagccagatgtgctcag
caggcggtaaaattgggacgaggccatatcgatgtaaaaaaggtgctttgtattgcgtca
ttggcatcatttattgcgggtgaccaccagcaggcattgaagtcggcgcaaaaagctata
cactgttacccggatgtcgcagaatgctgggcagtttttatccagagtgttatggtttta
caaaacaagaaatcaacattttcgcataaggagtggctacaaaaatgcgttagacatttt
aaagaaaatttggaaagctcaaagttgctaagtacgtggttagataaaattattgtacca
aagatgatgaatatgcgttaa
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integrated database retrieval system
