Pseudomonas qingdaonensis: KH389_26550
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Entry
KH389_26550 CDS
T07622
Symbol
crc
Name
(GenBank) catabolite repression control protein Crc
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KH389_26550 (crc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqi03400
]
KH389_26550 (crc)
Enzymes [BR:
pqi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KH389_26550 (crc)
DNA repair and recombination proteins [BR:
pqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KH389_26550 (crc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
QVL18874
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All DBs
Position
5795798..5796577
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AA seq
259 aa
AA seq
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MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGMNGDEDLN
QKFKLMDDFGKYLDKQRRKRREYIYCGSLYVAQQKLDVKNWRDGQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgttaatggcattcaggctgcagtcgagcgtggtttgctc
agctggctacaagcccagaatgccgacgtcatctgccttcaggatacccgcgcctcggcc
tttgaactcgacgacccagctttccagctcgatggctacttcctttatgcctgcgatgca
gaagttccagcccaaggcggcgtggcactctactcgcgtttgcagcccaaggcagtcatc
agcggcctgggcttcgagacagccgatcgctacgggcgttacctgcaggccgatttcgac
aaagtcagtattgccaccttgctgttgccttcgggcatgaacggtgacgaagacctcaac
cagaaattcaagttgatggacgacttcggcaaatacctggacaagcagcgccgcaagcgt
cgcgagtacatctactgcggctcgctgtatgtggcgcagcagaagctcgacgtgaagaac
tggcgcgacggccagcagtcgccgggtttcctggcgccagagcgggcctggatggacgag
atcgtcggcaacatgggctatgtggatgcgttgcgcgaagtcagccgtgagggcgaccag
tacagctggtggccggacaacgagcaggccgagatgctcaacctgggctggcgtttcgac
taccagctgctgaccccgggcctgcgccgcttcgtacgaagcgctcgcctgccgcgtcag
ccacgcttctcccagcatgcgccactgatcgtggactatgactggacgctgacgatctga
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