Pectobacterium quasiaquaticum: IG609_018260
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Entry
IG609_018260 CDS
T08268
Name
(GenBank) polysaccharide lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pqu
Pectobacterium quasiaquaticum
Pathway
pqu00040
Pentose and glucuronate interconversions
pqu01100
Metabolic pathways
pqu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IG609_018260
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG609_018260
Enzymes [BR:
pqu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
IG609_018260
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
URG48664
UniProt:
A0A9Q2ERJ1
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Position
3984366..3985490
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AA seq
374 aa
AA seq
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MKYLLPSAAAGLLLLAAQPTMAANTGGYATTDGGDVAGAVKKTAHSMQDIVDIIEAAKLD
SKGKKVKGGAYPLVITYNGNEDALINAAEANICGQWSKDARGVEIKEFTKGITIIGTNGS
SANFGLWMVNSSNVVVRNMRFGYMPGGAQDGDAIRIDNTPNVWIDHNEIFAKNFECAGTK
DGDTTFESAIDIKKASTNVTVSYNYIHGIKKVGLSGFSSSDTGRDLTYHHNIYDDVNARL
PLQRGGQVHAYNNLYTGITGSGLNVRQKGIALIERNWFENAKNPVTSRYDGSNFGTWELR
NNNVMSPADFAKYNITWDKDTKPYVNAEDWKSTGTFASVPYSYSPVSAQCVKDKLANYAG
VNKNLAVLTAANCN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctactgccttctgcagccgctgggctgttattgcttgcggcccaaccaacg
atggcggcaaatacggggggttatgccaccactgatggcggtgacgttgctggagctgtg
aaaaaaacagcacattccatgcaagatatcgttgatatcatcgaagccgcgaagctggat
tccaaaggtaagaaagtcaaaggcggcgcttacccgctcgtcatcacctataacggtaat
gaagatgcgttgatcaacgccgctgaggctaacatctgcggccagtggagtaaggatgca
cgcggtgtagaaatcaaagagttcaccaaaggcattactatcatcggaaccaacgggtct
tccgctaacttcgggctctggatggttaactcttccaacgttgtcgtgcgtaacatgcgt
tttggttacatgccgggcggcgcgcaggatggtgatgctattcgtatcgacaacacgccg
aacgtctggattgaccacaacgagatcttcgcgaaaaactttgaatgcgcaggcacaaaa
gacggtgacaccacgttcgaatccgcgattgatatcaagaaagcctcaaccaacgtgacg
gtgtcgtacaactacattcatggcatcaaaaaagtgggtctgagcggcttcagcagcagc
gatacgggccgtgacctgacttaccatcacaatatttacgacgacgttaacgctcgcctc
ccactgcaacgtggtggtcaggttcatgcgtacaacaacctgtacaccggcatcacaggt
tctggtctgaacgtgcgccagaaagggattgcgctgatcgaacgtaactggtttgagaat
gcgaaaaacccagtgacctcacgttatgacggttccaacttcggtacctgggaactacgt
aataacaacgtcatgagcccagccgatttcgctaagtacaacataacctgggataaagat
accaaaccctacgtgaatgccgaagactggaaaagcactggcacattcgcttctgttcct
tacagctactctccggtttcggcacagtgcgtgaaggacaaactggcgaactatgctggc
gtgaacaaaaaccttgccgtgctgacagcagcaaattgcaactag
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