Pieris rapae (cabbage white): 110993116
Help
Entry
110993116 CDS
T05162
Name
(RefSeq) transient receptor potential protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
110993116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prap04040
]
110993116
Ion channels [BR:
prap04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110993116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_3
Ank_5
DUF6046
Motif
Other DBs
NCBI-GeneID:
110993116
NCBI-ProteinID:
XP_045487702
LinkDB
All DBs
Position
16:8330409..8362126
Genome browser
AA seq
1187 aa
AA seq
DB search
MKRRKRSRRIRIRFDMNEDTMNRGSREELLGSSQEALRNSQHDLRNVYERPLTREEKTFL
LNADRGDYATVKRLIDEYASKPDVLDINCVDPLNRSALIAAIENENIELIRLFLEAGIKV
KDALLHAIKEEYVEAVEMLLQWEEEHHVPGEPYSWESVDPSSATFTTDITPLILAAHRNH
YEILKLLLDRGATLPVPHDVKCGCDECVKSSNEDSLRHSQARINSYRALSSPSLIALSSA
DPVLTAFELSWELNNLSHMETEFRVEYKALRQQVQEFATSLLDHTRTSEELEIMLNYNPW
ELDSWEPGERQTLGRLKLAIKYKQKMFVAHPNVQQLLGAIWYEGLPGFKRKNIVGQCVQV
AKLGAMFPIYCSIYMMSPESEYGQFMKKPFVKFICHSSSYMLFLSLLSLASQRAEFLVLE
YSGISWLQELVEYWKAHERGSLPGLIEFCVIVYIASLIWGEIRSLWNGGILEYISDLWNM
VDFITNMFYIAWICLRFSSWYIVQRDYKSGKDPWYPRERWDSFDPMLLSEGAFAAGMIFS
FLKLVHIFSINPHLGPLQVSLGRMILDIMKFFFVYMLVLFAFGCGLNQLMWYYAELEKNK
CYHLPNGDLPDFDNQERACTIWRRYANLFETSQSLFWASFGLVDLTCFELTGIKSFTRFW
ALLTFGSYSVINIIVLLNMLIAMMSNSYQIISERSDIEWKFARSNLWMSYFEDGDTVPPP
FNIIPTPKHVSGWINRICNERERGSVINKSREKARLQHESVMRVLVRRYVTAEQRARDEV
GVTEDDVMEIRQDISTLRFELIDILANNGMKTPRINMNETTISGKKGKVMERRILKDFQI
GIVEGIIKDVISKESKPKDVFSQIAKAIVRKGSPENKKKDWNAAVRTNTIRRDPIGSTSE
AETKRSRQSLRAHILDNVKDRTIDPQKLLEFNPKLSDVTPTTRVAYAKFMRSKIKSDFSE
REKSGISEKDFSIEDETASGKVKIKTPPFRPKIPIPVPTGDVNLKQNEIKVQAHIEEKGI
GGPSSPGGSNQKEATQPAEEAKPSTGSPGSEARVEKKEHVIQIENEPESPSKSLYITKEE
DSNLQKPITPTPSLHSKSEKPEQILSAATLEKDHSASRSDSKKDKENAEEAKEVPKEDKP
KQEKPKEPKPKPPKPKPAPAPEPASGPKMVTDKGKSKVTGKMVSGWL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaagaaaacgcagccgccgtatacgcattagatttgatatgaatgaggacacg
atgaaccgcggctccagggaggagcttctcggcagctcccaggaagccctgcggaacagc
cagcatgacctcaggaacgtctacgagcgcccactaacaagagaagagaagacatttcta
ctaaacgccgatcggggagactatgcaactgtgaaacggttgatagacgagtacgcatca
aaaccagatgtattggatatcaactgcgtagatccactgaacaggtcagcgctcatcgct
gcaattgaaaatgaaaacatcgaacttataagacttttcctcgaagctggcatcaaagtt
aaggatgcacttttacacgcgatcaaagaggagtacgtggaggctgtcgagatgctgcta
cagtgggaggaggagcatcatgtgcctggagaaccttatagctgggagtcagtagaccca
tcatcagctaccttcacaacagacatcactcctttgatcctagctgcccatcggaaccac
tatgaaatcctgaaactgctcttggatagaggcgccacgctgccagtgcctcacgacgtc
aagtgtggttgcgacgaatgtgtgaagtcatcgaatgaggattcgctccgtcactcgcag
gcccgcattaactcctaccgcgccctcagttctccatctcttatagctttatcttctgct
gatcccgtcctcactgcctttgaactatcctgggagctgaacaatcttagtcatatggag
actgaatttcgtgtagaatataaggccttaagacaacaagtacaagaatttgccacctca
ttgctagaccatacgcgtacctcagaggaattagaaattatgctaaactataatccttgg
gagttggactcctgggagcctggcgagagacaaactttgggcagactcaaactggctatt
aaatataaacagaaaatgtttgtggcacatcctaacgtacaacagctactcggcgccatt
tggtatgaaggtcttccaggttttaaaagaaaaaacatcgtcggacaatgtgttcaggtg
gcaaaactcggtgctatgttcccaatatactgttcaatatacatgatgtcccccgaatcg
gaatacggtcaatttatgaagaagccattcgtcaaattcatctgtcacagttcatcatat
atgctatttttatctctattatcgttggcatctcaaagagcggagtttctcgttttggaa
tattcaggaatatcgtggctgcaagagttagtggaatattggaaggctcatgaaagagga
tcgttacctggtctaatagagttctgcgtcatcgtctacatagcaagtttaatatggggt
gagattcgttcactttggaatggcggtatattggagtacataagcgacctttggaatatg
gtagacttcatcacgaacatgttttacatcgcctggatctgtctgcgtttctcttcgtgg
tacattgtacaacgcgactacaaaagtggcaaggatccatggtaccctagggagcgttgg
gactctttcgacccgatgctcctctccgaaggtgcttttgcagccggcatgatattctcc
ttcctgaaactggtccacatcttctctatcaaccctcatcttggtcccctccaggtttcc
ctcggcagaatgatattggatattatgaagttcttcttcgtttacatgttggtgctgttc
gcttttggatgtggtctgaaccagctgatgtggtactacgcggagttggaaaaaaacaaa
tgctatcatttgccgaatggagatcttcccgacttcgataatcaggaaagggcctgtacc
atttggagacgttatgctaatttattcgaaacatcccaatccctcttctgggcgtccttt
ggtctcgtggatttgacctgcttcgagttgactggcataaaaagcttcactcgcttctgg
gcgctcctcacattcggttcctactccgtcatcaacatcattgtactactgaacatgctc
atcgctatgatgtcgaactcttatcaaattatttccgaaagatcagatattgaatggaaa
ttcgctcgcagtaacctttggatgtcgtactttgaagatggagacacggtgcctccaccg
tttaacatcattcccacgccgaagcacgtctctgggtggattaatagaatatgtaatgaa
cgggagaggggctcggttattaacaaatctcgtgaaaaagcacggctccaacacgagtct
gtgatgcgtgtgttggtccgtcggtatgttacggctgaacaacgggcgcgagatgaagtc
ggtgttactgaagacgatgtgatggagatacgacaggatatatcgacattgcggtttgaa
ttgattgatatattagcaaataatggcatgaagacaccaagaattaatatgaatgaaacc
acaatttccggcaagaaaggtaaagttatggagaggcgaattctcaaagacttccaaatt
ggtatagttgaaggtatcatcaaggatgttatatccaaagagagcaaacctaaggatgtg
ttcagtcaaattgctaaggccattgtcagaaagggaagtcctgaaaataaaaagaaagat
tggaatgcggcggtcagaacgaacactatacgaagagatccaattggaagtacctctgaa
gccgaaactaaacgcagcagacagtcactacgcgcgcatattcttgataatgttaaagat
agaaccattgatccacaaaaattgttagagtttaaccctaaactatcggatgtaacgcca
acaacacgagtcgcatacgccaagttcatgagaagcaagatcaaatcagacttcagcgaa
cgagagaagagcggcatttcagaaaaagatttcagcattgaagacgaaacggcatctgga
aaagttaagattaagactccaccatttagacccaaaataccaataccagtaccaacaggt
gatgtgaacctgaaacaaaacgaaattaaagttcaagcacacatcgaagagaaaggaatt
ggtggtccctcaagcccaggtggatccaatcaaaaagaagcaacacagccagcagaggaa
gcaaaacctagcacaggatcaccaggctctgaagcaagagtcgaaaagaaagaacacgtt
atccaaatagaaaatgaacccgaatcaccatccaaaagcttatacataaccaaagaagaa
gactctaatttacaaaaacccatcacacccacaccaagtttgcattcgaaatcagaaaaa
ccagaacaaatcctctcagcggctacgttagaaaaggatcatagtgcatctagatctgat
agcaagaaggataaagaaaacgcagaggaagcaaaggaagtccccaaagaggataaaccg
aaacaagaaaaacctaaagagcctaaacctaagcctcccaaacctaaacctgctcctgca
cctgaaccggcatcaggtccaaaaatggtgactgacaaaggcaaatctaaagtaacaggt
aaaatggtatcaggttggctgtag
DBGET
integrated database retrieval system
