Pieris rapae (cabbage white): 110998344
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Entry
110998344 CDS
T05162
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110998344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110998344
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110998344
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GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
ANAPC3
TPR_12
ANAPC8
TPR_8
Motif
Other DBs
NCBI-GeneID:
110998344
NCBI-ProteinID:
XP_022122619
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Position
14:complement(208369..210544)
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AA seq
565 aa
AA seq
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MSNHAEEPAILAQQCYLKKDYAAALQHLSELENLVRDNKVLLKRVQHNKAVVELAASDLK
NIENFKTCMSDSAGVDFPDEEVTEISSPFALYNYAVILYHYRYYYQSVVILEKLLTSKVI
KDKKLLHYVILLLLECTLCRRTYEKTLEIANAYADSFKSNNELSNLHQRLISRAQVFLGQ
KINLKADSIENALIVAQQQYLNGNVKDSCNTISLYTSLECRYDVRNEGEDVWAALNNNLG
VIYLSLKKPYLATKYFQNALKEHFKNLESDDGDRLIICKDHPIYVYNLGLALHATKNIEG
AFECLVEAARHYPNNPQIWVRLAECCIKKCCSDEVQKFIVKKLGNGSHTRVLVAKEKEKY
SLAGESYAIPSLSLEFAALCLRNAITLLLNQESPTDETHPFIQAPPGPPINWKQRCELKN
SIHVLQSYVYLHLQDPLAALVSANELLSESDASNGHKTWAHIYAAEALIILDKTVEAIEH
LKPTMIHELVSGLPDQTRDIIGLAVWAKAAVCNILRGDLLQARKILQQINSSKVLPLQIY
VEICLGSVENCHTLLRKIRYSHVSQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcatgcggaagaaccagcaatattggctcagcaatgttatttaaaaaaagac
tatgcagcggcactacaacatcttagtgaattagaaaatcttgttagggataataaagtt
ctccttaaacgtgtacaacataataaagcagtggttgaattggctgcgtctgatttgaaa
aatattgaaaactttaaaacatgtatgtctgatagtgctggtgtagattttccagatgaa
gaagttaccgaaatatcatctccttttgcgttatataactatgcagtcatattatatcac
tatcgatattactaccaaagtgtagtaatacttgagaaattattgacttcaaaggttatt
aaggataaaaagttactacattatgttatattactcctgttagaatgcactctttgcagg
cgcacttacgaaaaaacactagaaattgcaaatgcttatgctgatagctttaaatcaaat
aatgaattaagtaatttgcatcaacgtctcattagcagggctcaagtgtttcttggacaa
aaaattaatctaaaggcagactcaatagagaatgctttaatagtagcacaacaacagtat
ctcaatggtaatgttaaagattcttgtaacacaataagtttgtatacatcattagagtgc
cgttatgatgtgagaaatgaaggtgaagatgtttgggctgcattaaacaataatcttgga
gttatctacttgtcattaaaaaaaccttacttggcaacaaaatacttccaaaatgcatta
aaagaacattttaaaaatttagaaagtgatgatggtgacaggcttattatttgtaaagat
catccaatttatgtctataatcttgggttagcactacatgctactaagaacattgaagga
gcatttgagtgtctagtggaagctgcaagacattacccaaacaatccacaaatctgggtg
agactagctgagtgttgtattaaaaagtgttgcagtgatgaagtgcaaaagttcattgta
aaaaaacttggtaatggctctcatacaagagtccttgttgcaaaagaaaaagagaaatat
tcattagctggagaatcatatgctataccatcactttctctcgagtttgcagcactttgc
ttaagaaatgcaataacattgctacttaatcaagaatctcccacagatgaaacacatcct
tttattcaggcacctcctggccctcctattaactggaaacaaagatgtgaattaaagaat
tcaatacatgtcctgcagagttacgtttacttacatcttcaagatcctctagctgcttta
gtcagtgccaatgaattgttaagtgaaagtgatgcttcaaatggtcataaaacttgggct
catatctatgctgctgaagcattgattatactggacaagacagtggaagcaattgaacat
ttaaagccaacaatgattcatgaacttgtatctggtcttcctgatcaaaccagagacata
attggtctagcagtatgggctaaagctgctgtgtgtaatatattgcgtggagatctttta
caggcaaggaaaatcctccagcaaataaattcttccaaagttttaccgttacaaatatat
gtagaaatttgcttaggatctgtagaaaactgtcatacattactgcgaaaaatacgatat
tctcatgtatctcaatag
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