Pieris rapae (cabbage white): 111001407
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Entry
111001407 CDS
T05162
Name
(RefSeq) TNF receptor-associated factor 6-A isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04013
MAPK signaling pathway - fly
prap04120
Ubiquitin mediated proteolysis
prap04140
Autophagy - animal
prap04144
Endocytosis
prap04214
Apoptosis - fly
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111001407
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
111001407
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111001407
04140 Autophagy - animal
111001407
09143 Cell growth and death
04214 Apoptosis - fly
111001407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prap04131
]
111001407
04121 Ubiquitin system [BR:
prap04121
]
111001407
Enzymes [BR:
prap01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111001407
Membrane trafficking [BR:
prap04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111001407
Ubiquitin system [BR:
prap04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
111001407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-TRAF
zf-RING_5
zf-rbx1
U-box
zf-Nse
Sina_ZnF
TRAF3_RING
zf-RING_10
Prok-RING_4
zf-RING_6
zf-P11
MAP6
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
111001407
NCBI-ProteinID:
XP_022126992
LinkDB
All DBs
Position
18:complement(4206313..4210563)
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AA seq
416 aa
AA seq
DB search
MDQNNTKNASEGIAPMGITALNETVLSNQPESRYECPVCLNWLRDPVITTCGHKFCKSCI
TSWLQNSGHCPIDNINLSMKVDIFPDNYTKREIQEQRMSCPFAGKGCTVKVTPLDLDAHI
STCEFNQPEASTCHDVRTPCSFSAVGCKETFDNQEAANAHLHNDILSHMSLLMNAYSKIK
IDNDMSNTSIDAKEQEALLWEAPDKNGNEASTPLPNDTSALIRALYERVVVLEQRNREQD
IVIANISKQLSAFAVAKMKQNNDMLLRYCMGNYIWKVDNFKARLEAMLKDHNKMLYSPGF
YTSPNGYRFCVRLNISPLNPLCFALHVHLMKTENDEYLDWPFNGRISFSMINQYDSEYTQ
RDTMMSNSSLVAFRKPTSEICVRGFGYNEYAEVSDVVRNGFVKNDVLIISVRIKCV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaataatactaagaatgcgtcggaaggaatagcaccaatgggtataacagcc
ttaaatgaaacggtgctaagcaatcaaccagagtcaagatatgaatgtcctgtatgtttg
aattggttaagagaccctgtcatcacaacctgtggtcacaaattttgtaaaagttgcatc
acttcatggttacaaaacagtggtcactgtccaattgacaatataaatctcagcatgaaa
gtagatatatttcctgataactatacaaaacgtgaaatacaggagcaaaggatgtcttgc
ccatttgcgggtaaaggatgtacagtaaaagtgactccattagatttagatgcacacata
tcaacttgtgaatttaatcagccagaggcatccacatgccatgatgttaggacaccatgc
tctttcagtgctgtcgggtgtaaagagacatttgacaatcaggaagctgctaacgcacat
ttacataatgatatattgagtcatatgagtcttttaatgaacgcgtattccaagatcaaa
atagacaatgacatgtcaaacacaagtatagacgctaaggagcaggaggctctactttgg
gaagcacccgataagaatgggaatgaggccagtacaccgcttcctaatgacaccagcgct
cttataagagccctctatgaacgagtggtagtactagaacaaagaaatcgcgaacaggat
atagtgatagcaaacatttctaaacaactctcagcctttgctgtcgcaaagatgaaacag
aacaatgacatgctactcagatactgtatgggcaattatatatggaaagtggacaatttc
aaggcacgattagaagcaatgctcaaggaccataataaaatgttgtacagccctggattt
tacacttctccaaatggatatagattttgcgtccgcctgaacatatctccgctcaacccg
ctctgtttcgccctccacgtgcatttaatgaaaactgagaacgacgaatacctggactgg
ccttttaatggcagaatatccttttccatgatcaatcagtatgactccgaatacactcaa
agggacacaatgatgtcgaactcgtctttggtggcattcagaaaacccacttcggaaata
tgtgtgaggggttttgggtacaatgagtacgccgaagttagcgatgtggtgaggaacgga
tttgttaaaaacgacgtgcttattatcagtgttagaatcaaatgtgtatga
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