Pieris rapae (cabbage white): 111002031
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Entry
111002031 CDS
T05162
Name
(RefSeq) exosome complex component MTR3 isoform X1
KO
K12587
exosome complex component MTR3
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111002031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111002031
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111002031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
TPR_ATM
Motif
Other DBs
NCBI-GeneID:
111002031
NCBI-ProteinID:
XP_022127813
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All DBs
Position
20:7195852..7197110
Genome browser
AA seq
311 aa
AA seq
DB search
MPFDYRRFNGPEDSVSYKRFSADFLRTYDELYRDLLDENGKRKDGRALNEARSLCTSFTR
TNVVSQAKGSAYVEFNKTKVICSVFDPREMSGHQNEYSWFGQIYCEVKFAPFCCPRKRRQ
LVPDTDERALSADLKKALETVVRRDKFPNFQMDIFVYILEHDGGCLSAAINAAGLALTDA
VVPMYDIVSASSVAIINDQIIIDPTEAEEHLALMYTDKEKNHGIITMCIMHHLRQFTDFR
QIGSVDAECVLKVMDILEKECDKLMPVIKKIMVSNVVRQHNEHKILLEEAKFREEVLQSK
VEEWRKLLNAG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgattaccgccgatttaatggtccagaagatagtgtttcatataaacgcttt
tctgcagattttctgcgaacctacgatgaactatatagagacttactagatgaaaacggt
aaaaggaaggatgggcgcgcattgaatgaagcacgaagtttgtgtacgtcttttactaga
acaaatgtagtatcacaggcaaaagggtcggcatatgtggaatttaacaaaacaaaggtt
atttgttccgtgtttgatcctagagaaatgtctggtcatcagaacgaatatagttggttt
ggccaaatctattgtgaagtgaaattcgcgccattctgttgtcctcgaaaaagaagacaa
cttgttccagatacagatgaaagagctttatcagctgatctaaaaaaagctttagagact
gtagtccggagagataaattccctaattttcagatggacatatttgtttacatcttagaa
catgatggtggttgcttatctgcagcaataaatgctgcaggattagcattaaccgatgca
gtggtgccaatgtatgatatagtttcagccagttcagttgctataatcaatgatcagatt
ataattgaccctacagaagcagaagagcatttagctttaatgtacactgataaagagaaa
aaccatggcatcataacaatgtgtattatgcaccatttaagacaatttacagattttcgg
caaattggttcggttgatgctgaatgtgtattaaaagttatggatatattagaaaaagag
tgtgataaattaatgccagtaataaagaaaattatggtgagcaatgttgttaggcaacat
aatgagcataaaatattattagaagaagcaaagttcagggaagaagtgcttcaaagcaaa
gtcgaggaatggagaaagttattaaatgcaggatga
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