Pieris rapae (cabbage white): 111003527
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Entry
111003527 CDS
T05162
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prap04040
]
111003527
Ion channels [BR:
prap04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111003527
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
Zip
Motif
Other DBs
NCBI-GeneID:
111003527
NCBI-ProteinID:
XP_045484092
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All DBs
Position
5:9149448..9195085
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AA seq
2091 aa
AA seq
DB search
MSEDLDSISEEEQSLFRPFTRESLAVIEARIAEEHAKQKELEKKRAEGETDLGRTKKKKE
VRYDDEDEDEGPQPDATLEQGLPLPVRMQGSFPPELSSTPLEDIDPFYQNQTTFVVISKG
RDIFRFSATDALWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
VKVFPEDGSWGNLTDENWERFCQNETNWYSENDDYPLCGNSSGAGTCEPGYICLQGYGPN
PNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGSWHVLFFVVIIFLGSFYLVNL
ILAIVAMSYDELQKKAEEEEQAEEEALREAEQKAAARADKQEAREQHAREQAAAAEAAAY
AEAHPAKSPSDFSCQSYELFVNQERGNQDDNTRERMSLRSDPFQDSVSTQPTHKPANDTH
HDTARRQRKVSMVPHPERINKYGQLSYGPLREGSQASLSLPGSPFNLRRGSRGSHQMALR
PNGRNRYPPGADRKPLVLSTYLDAQEHLPYADDSNAVTPMSEENGAIIIPVYYANLGSRH
SSYTSHQSRLSYTSHGDLLGGKAQTKEAKLRGRSASRNHSITSQPHAYALPRQESSLVSR
PLREYEVSTTECTDEAGKVLKQSNDNPFIESSQQPNVVDMRDVMVLNEIIEQAGRQSRAS
EQNVSVYYFSTAEDDDEGPTFKERLLEWLMKGIDFFCVWDCCWLWLEFQKYVALLVFDPF
VELFITLCIVVNTLFMALDHHDMDKDMERALKSGNYFFTATFGIEAMLKLIAMSPKYYFQ
EGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGA
LGNLTFVLCIIIFIFAVMGMQLFGKNYVDYVDRFPGGELPRWNFTDFMHSFMIVFRVLCG
EWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSTPTADQDTNK
IAEAFNRISRFIDWVKKNAADFLKIVKSKLTNQIAIHAPGLKAALCARCVSSERVDNELE
LGADIEDGVLFKDKKLKDQVEVAIGDGMEFTIPGDNKYKKGNILMNNINAITDNHTDNRI
NCEINHHGYPIQDDDTISQKSYGSHKIRSFKDESHKGSADTIDGEEKKDASKEELGLEEE
MIEEEEDGKLDGLAKIDIKVAADEDVVDLTPADCCPEPCYARFPFLAGDDESPFWQGWAT
LRLKTFRLIENTYFETAVITMILLSSLALALEDVHLPHRPILQDILYYMDRIFTVIFFIE
MLIKWLALGFQKYFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRA
MSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDMNHTTLSH
EIIPDRNACILENYTWENSPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSREVGRQPI
RETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAM
KKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDMIIMLFIGFNMLTMTLDHYQQTETFSQ
ILDYLNMIFIVIFSSECLLKIFALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVS
PTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSF
FMHVKNKGGLDDVYNFKTFVQSMILLFQMSTSAGWDGVLDGIINEEECDLPDNERGYPGN
CGSATIGITYLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQRF
DPEGTQYIRYEQLSDFLDVLEPPLQIHKPNKYKIISMDIPICRGDMMFCVDILDALTKDF
FARKGNPIEEPGDIVGRPGEVGYEPVSSTLWRQREEYCARLIQHAWRRHRRAHSPAGEGV
GGDGSGGECSAGGAETAVLLDSSGGSAHRVVLQGGGESPRPPEPAPPPAPV
NT seq
6276 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagacttggactcgatcagcgaggaagaacaaagtttgttccgacctttcact
agagagtcattggccgttatcgaagcccgcatagctgaggagcatgccaagcaaaaagaa
ctcgaaaagaaacgcgctgaaggcgagaccgatttggggcggacgaaaaagaaaaaagaa
gtgcgttacgatgacgaggacgaagacgaaggtcctcaaccggacgcgaccctcgagcag
ggtctacccctgcccgtacggatgcagggatccttcccccctgaactatcctccacgcct
ctcgaagacatcgatccgttctaccaaaatcaaaccacattcgtagtcataagcaagggt
agagatatcttcagattttcggcgacagatgcgttatggatgttggatccgttcaacccg
ataaggagggtcgctatatacatacttgtacatcctcttttctctctgttcatcattaca
acgatccttgtcaattgtatcttaatgataatgccgacgacgccaaccgtcgaaagtact
gaagttatctttaccggaatctacacgtttgaatcggcggtgaaagtaatggccaggggt
ttcattctacagccattcacataccttagagatgcatggaattggcttgacttcgtagtt
atagctttagcttatgtgacgatgggcatagatctcggcaacttggccgctcttagaacg
ttcagagttctccgagcgctgaagactgtggccatcgtaccggggttgaagactatcgtt
ggtgctgtcatagagtctgtgaaaaatcttcgcgatgtgattattttgacaatgttctcg
ctatctgtatttgcgttaatgggcctacaaatctacatgggagtgttaacgcagaaatgt
gtaaaggtattccccgaagacggcagttggggcaacctgactgatgagaactgggagaga
ttttgtcaaaacgaaacgaactggtatagtgaaaatgacgactatccattatgcgggaac
tcatcaggagcaggaacatgtgaaccaggctacatatgtttacaagggtacggaccaaac
ccaaactacggctacacgagtttcgacacgttcggttgggcgtttctatcagctttcaga
ttgatgacgcaagattactgggaaaatttatatcaactggttctaaggtcggctggttca
tggcacgtgctgttcttcgttgtgatcattttcctcggctctttctatctcgtcaacttg
atcttggccatcgtcgccatgtcatacgacgagttgcagaagaaagcagaggaggaggaa
caggctgaagaagaagcactaagggaagcggaacaaaaggcagcggctcgagcggataag
caagaagcgagggaacaacacgctcgcgagcaagccgccgcggcggaagcagccgcatac
gccgaagcacatcctgccaagtctcccagtgacttctcctgccagagctacgagttgttc
gtcaaccaggagaggggcaatcaggatgacaatacgagggaacgcatgtcccttcgtagc
gaccccttccaggattcggtgagcactcagcccacgcacaagcctgccaacgacacccac
cacgacacagcacgccggcagaggaaggtcagcatggtcccccatcctgaacgcattaat
aaatatggacagttgtcgtatgggccactgcgggagggctcacaggcttctttatcacta
cctggatcaccgttcaatttgcgacgcggttcccgaggatctcatcaaatggcgttgaga
ccgaacggaaggaataggtatccaccgggagccgatcggaaaccacttgttttatcaaca
tacttggacgcacaggaacatctgccttatgctgatgactcaaatgcagtcacgcccatg
tcagaggagaacggcgctattataataccagtctactatgcgaacttgggatcaagacat
tcctcctatacatcacaccagtctaggctatcatatacgtcgcacggcgatctcttaggg
ggaaaagctcaaaccaaggaggccaaacttagagggcgatcggcatccaggaaccacagc
attacttcccaacctcacgcctacgcgctgcccagacaagagtcgtcgctggtatctcga
ccattaagagaatatgaagtaagtacaacggaatgtactgatgaggctggcaaagttttg
aaacaatcaaatgataatccgttcattgagtcatcacagcagccaaatgtcgttgatatg
agagatgttatggtactaaatgaaataattgaacaagctggaaggcaaagtagagcgagc
gagcaaaatgtgtcagtatactacttctcaacagctgaagatgacgatgaagggcccaca
ttcaaggagcgactcctggagtggctcatgaaagggatagacttcttctgtgtgtgggat
tgctgctggttatggctcgagtttcagaaatacgtcgcactcttggtgttcgatccgttt
gtagaactgttcatcacgttgtgtatcgtggtcaatactctgtttatggcactggaccat
cacgacatggacaaagatatggaaagagcgttgaaaagtggtaattattttttcacggct
acgttcggtattgaagcgatgctaaaattaatagcaatgagtcccaaatattactttcaa
gaaggatggaacatattcgactttatcattgtggccttatcattattggaattaggactg
gaaggggttcagggtttgtcagtattgcgttcattccgattgcttcgagtattcaaattg
gcaaagtcatggccgactcttaatttactcatctctataatgggtaggacgatgggtgcc
ttgggcaacctgaccttcgtattgtgcatcattattttcatatttgccgtgatgggtatg
caactattcgggaaaaattatgtggattacgtagaccgttttcctggtggagagctccca
aggtggaacttcacggatttcatgcacagtttcatgatagtattccgagtattatgtgga
gaatggatagagagtatgtgggattgcatgctggttggagatgtttcttgtatacctttc
ttcttggcaacggtcgttattggcaatcttgtggtacttaacctcttcttggccctgtta
ctgtcaaattttggttcgtcaagtctatcgacgccaacagccgatcaggacacgaacaaa
atcgcggaggcttttaatagaatatcccgatttatcgattgggtcaaaaaaaacgcagcc
gattttttaaaaatagtcaaaagcaaattgacgaatcagattgctatccacgctccgggc
ttaaaagcggcattatgtgcccgctgtgtttcttcagaacgagtcgacaatgaactggaa
ttgggtgccgatatcgaagacggggttttattcaaagacaagaaactaaaagatcaagtg
gaggtagctataggtgacggaatggaatttacgataccaggcgacaataaatataaaaaa
ggaaatatattgatgaataatattaatgctataacggataatcatactgacaatcgaatt
aactgtgaaataaatcatcatggttatccgatacaggatgatgatacaattagtcaaaaa
tcttatggtagtcataaaataagatcatttaaagacgaaagtcataaaggatctgcggat
acgatagacggagaagaaaagaaagacgcaagtaaagaagaattaggtttagaagaagaa
atgattgaagaagaggaggatggaaaacttgatggcttagcaaaaatagatataaaggtg
gccgcagacgaggatgtagtggacctcacaccagcagactgttgtccagaaccttgctat
gcgcgcttccccttcttagctggagatgacgagtctccattttggcaaggctgggcaacc
cttagactgaaaaccttccgattaatagaaaatacctatttcgaaacggctgtgataaca
atgattttacttagtagtttggcattggcgttagaagatgtccatctaccacatcgacca
attcttcaagacatcttatattacatggatcgtatattcacagtaatattctttattgag
atgttaatcaaatggttagctctcggatttcagaagtacttcaccaacgcctggtgctgg
ctcgatttcattattgtcatggtgtcgcttataaacttcgttgcggcgctttgtggcgct
ggaggcattcaagcattcaaaacgatgagaactctccgagcccttcgaccactcagggct
atgagccgcatgcagggcatgagggttgttgtaaacgcgttagtacaagccattccatcc
atcttcaacgtactgctcgtatgtcttatcttctggctaattttcgctattatgggagtt
caactgtttgctggaaaatattttaagtgtgtcgacatgaaccatacaacactgagccat
gaaataattcccgatcgtaacgcgtgcattttggaaaattacacatgggaaaattcaccg
atgaacttcgatcacgtcggaaaagcttacctatgtttgttccaagtggccacgttcaaa
ggctggatacaaatcatgaatgatgctatcgactcgcgagaggtcggccgccaaccaatc
agagaaactaatatctacatgtacctgtacttcgtgttctttattatatttgggtctttc
ttcacccttaacctatttataggagtaatcattgacaactttaacgaacaaaagaaaaag
gctggtggaagtcttgaaatgttcatgactgaggatcagaagaaatattacaatgctatg
aagaaaatgggatccaagaaaccgttgaaagctatcccaagaccaagatggcgaccacaa
gcgatagtattcgagattgtgacggataagaagttcgacatgattatcatgttgttcatc
ggtttcaatatgttaacgatgacactagatcactatcaacaaacagaaacgttcagccag
atcctggattatctaaatatgatcttcatcgttatatttagttcagagtgtctgttgaaa
atatttgcattgcgctatcactatttcgttgaaccttggaatctatttgatttcgtcgtt
gtcatgttttctattctcagtctggtgttaagtgacattattgagaaatattttgtatct
ccaactttgttgagagtagtgagagtggcaaaagttggtagagtgttgcgtcttgtaaaa
ggagctaagggtattagaactctactgtttgccttagcgatgtcactacccgctcttttc
aatatctgtttactacttttcttggtcatgtttatttttgcgatatttggaatgtcgttc
tttatgcacgttaaaaataaaggaggccttgatgacgtctacaacttcaagactttcgtg
cagagtatgattctactcttccagatgtcaacgtcagcgggttgggatggcgttttagat
ggaataatcaacgaagaagagtgtgatttaccagataacgaacgagggtatcccggtaac
tgtggttctgcgaccattgggatcacgtacttactgtcttatttggtcatatctttccta
atcgttatcaacatgtacattgccgtcattctcgagaattactctcaggcgaccgaagac
gtgcaagaaggtttgaccgacgacgactacgacatgtactatgaaatttggcaaagattc
gatccggaaggaactcagtacatccgctacgagcaactgtcagacttcctcgacgtcctc
gaaccgccactacagattcacaaaccgaataaatacaaaatcatatctatggatattccg
atctgtcgcggcgacatgatgttctgcgtggacatcctggacgccctgacgaaagacttc
tttgcccgaaagggcaaccctatcgaggagcccggagacatcgtgggtcggccgggcgag
gtcggctatgagccggtgtcctcgacgctatggcgacaacgcgaggagtactgcgcgagg
ctgatccagcacgcttggcggcggcatcggcgcgcgcattcgcctgccggagagggcgtg
ggcggggacggctcgggtggcgagtgcagcgcgggcggcgccgagacggccgtgctgcta
gactcttcgggcggcagtgcgcaccgtgtggtgctgcagggaggtggagagtctcctcgc
ccgcccgagccggcgccgccgcccgcgcccgtctga
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integrated database retrieval system
