Pradoshia sp. D12: F7984_06480
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Entry
F7984_06480 CDS
T06218
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
prd
Pradoshia sp. D12
Pathway
prd00240
Pyrimidine metabolism
prd00250
Alanine, aspartate and glutamate metabolism
prd01100
Metabolic pathways
prd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
F7984_06480 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
F7984_06480 (carB)
Enzymes [BR:
prd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
F7984_06480 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MGS
CPSase_L_D3
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
RimK
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QFK70916
UniProt:
A0A5J6XMG7
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All DBs
Position
1312194..1315406
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AA seq
1070 aa
AA seq
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MSKRTDIKSILVIGSGPIVIGQAAEFDYAGTQACLALKEEGYRVVLVNSNPATIMTDTEI
ADAVYIEPLTLEFVSKIIRKERPDALLPTLGGQTGLNLAVELSNSGVLEECSVEILGTKL
SAIEQAEDRDLFRTLMNELNEPVPDSAIIHNLEEAEAFVQTVGYPVIVRPAYTLGGTGGG
ICSNEEELREIVAGGLKSSPVTQCLLEKSIAGFKEIEYEVMRDSNDNAIVVCNMENIDPV
GIHTGDSIVVAPSQTLSDREYQLLRNASLKIIRSLKIEGGCNVQLALDPDSFNYYIIEVN
PRVSRSSALASKATGYPIAKLAAKIAVGLTLDEMINPVTGKTYASFEPALDYVVTKIPRW
PFDKFEEGNRTLGTQMKATGEVMAIGRTFEESLLKAIRSLEVGILHFELPKAEMIMDEEI
EKQIKKATDERLFYIAEGLKRGLTIQLIHEWSRIDLFFLHKFAKIVEMEAKLLEAPFHPG
YTLIAKKLGFSDYILAKLWNSSELEVYQWRMDNQIKPVFKMVDTCAAEFESETPYFYSTY
EDENESIITPKRSVVVLGSGPIRIGQGVEFDYATVHSVWAIKEAGYEAIIINSNPETVST
DFSISDKLYFEPLTIEDVMNVIDLEKPEGVIVQFGGQTAINLASALVERGVKILGTSLED
VDRSENRDMFEQALTELNIPQPKGKTALSVEEAVEVADEIGYPILVRPSYVLGGRAMEIV
DDQEDLLHYMENAVKINPKHPVLIDRYLTGKEIEVDAISDGETVVIPGIMEHIERAGVHS
GDSIAVYPPQNLSESMKEKIIDYTIKLAKGLNIIGLFNIQYVVSNNEVYVIEVNPRSSRT
VPFLSKITNVPMANLATKVILGQKLKDYGFENGLVSEKTGVYVKVPVFSFAKLRQVEITL
GPEMKSTGEVLGKDDTLQKALYKGLIASGIQIKQYGTVLLTVADKDKEEAVLLAERFNEI
GYQIIATEGTAQALDQANIPCRIVGKIGSEEPNLLDMIHNGKAQLVINTLTKGKQPERDG
FRIRRESVENGIPCMTSLDTANAILTVLESLTFSTTKMNHMQTAKEAISL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacgtacagatattaaatccatcctggttattggatccggaccgattgtaatc
ggccaggcagcagaatttgattatgcgggtacacaagcttgtctggcattaaaagaagaa
gggtatcgtgtagtcctggtaaattccaacccggctacaattatgacagacacggaaatt
gcagatgcggtttatattgagccattaacgttagagtttgtcagtaaaatcatccgtaaa
gaacgccctgatgctttattgcccacacttggaggccaaactggactaaatctggctgta
gaactgtccaattctggagtgctcgaggaatgcagtgttgaaattctgggaacaaagcta
tcggcaattgagcaggctgaggaccgtgatctattccgaaccttaatgaacgaattgaat
gaaccggttcctgacagcgcaattattcataatctggaagaagccgaggcttttgttcag
actgtaggataccctgtaattgtacgaccggcttatacacttggagggacaggcggcgga
atctgttcaaacgaagaggaattacgcgagattgtagccggtggtctcaagagcagtcct
gtcacccaatgcttgctggaaaaaagtattgcagggttcaaggaaattgaatatgaagtc
atgagagattcgaatgataatgcaatcgtggtttgtaacatggaaaatatcgatcctgtc
ggaatacatacgggagattcgattgtagtggcaccgagccaaacattgagtgatcgagaa
tatcaattattgcgcaatgcgtcgttgaaaattattcgttctttaaaaattgaaggaggc
tgtaatgttcagcttgctcttgatccagatagcttcaattactacattatcgaggttaac
ccaagggtgagccgttcgtctgcacttgcttctaaagcaaccggttatcccattgcaaag
cttgcagctaaaattgcagttggtttgacacttgatgagatgatcaatcccgtaactgga
aaaacatatgcgagctttgaaccggcacttgattatgtcgtaaccaaaataccacgctgg
ccatttgataaatttgaggaagggaacagaaccctcggaacgcaaatgaaagcaactggt
gaggttatggcaattggcagaacgttcgaggaatctctattaaaagcaattcgctcccta
gaggttggaatcttacactttgaattgcccaaggctgagatgattatggatgaagagatt
gaaaaacaaattaaaaaagcaacagatgaacgtctattttatattgctgaagggctgaag
cgcggattaacgattcagttgatccatgaatggtctcggattgatttattctttctgcat
aaatttgcaaagattgttgagatggaagctaaactattagaagcccccttccatccggga
tatacattaatagccaaaaaacttggtttctctgattatatcttagcaaagctttggaat
agctctgaattggaagtgtatcaatggcgcatggacaatcaaattaaaccggtatttaaa
atggtcgatacctgtgctgcggagtttgaatctgaaacaccatatttttactccacttat
gaggatgagaatgaatcaatcataacaccaaagaggagtgtcgtcgtacttggttcagga
cccattcgaatcgggcagggagttgaatttgattacgcaactgttcattctgtctgggcg
attaaagaggccggctatgaagcgattattataaacagcaatccggaaacggtctcaact
gattttagcatatcagacaaattatattttgagcccttaacgattgaagatgtgatgaat
gtcatagatttagaaaaaccagaaggggttattgtacaatttggcggccagactgccatt
aatcttgcctcagcccttgtagaaagaggagttaagatactgggaacgtctttagaggat
gtagatcgatctgaaaatcgcgatatgtttgagcaagctttaacggaactgaatatcccg
cagcctaaagggaaaacagccttgtcagtggaggaagcagtcgaagtggctgatgagatt
ggataccctattttggtaaggccgtcctatgttctcggtggaagggcaatggagatcgtg
gatgatcaggaggatttactgcattatatggaaaatgccgtaaagataaatccgaagcat
cctgtattaatcgatcgttatttaacagggaaagaaattgaagtggatgcgatttctgat
ggtgaaacagttgttattccgggaatcatggagcatattgaacgggctggcgtccattcc
ggcgattctatagcagtctaccctccacagaatctatcagagagtatgaaagaaaaaatc
atagattatacgattaaactggcaaagggtttaaatatcattggcttgtttaatatccaa
tatgtagtctccaataatgaagtgtatgtaattgaagttaatccccgttcaagcaggact
gtgccgttcttaagcaagatcactaatgttccaatggcaaacttggctactaaggtcatt
ttgggacaaaagcttaaagattatggtttcgaaaatggtcttgtatctgaaaagacgggt
gtttacgtaaaagtaccggtattttcattcgcgaagctacgccaggttgaaattacgctc
ggaccagaaatgaagtcaacaggtgaagtgctgggaaaagacgatacattacaaaaggct
ttgtataaagggttaattgcatcaggaattcagataaagcaatatggaactgtcctcttg
actgttgcggataaagacaaagaagaggccgttttacttgcggaacgtttcaatgaaatc
ggctatcaaatcattgctacagagggaacggctcaagcgttagatcaagcgaatattcca
tgtcgaattgttggaaaaattggcagtgaagagccgaacttattggatatgattcataat
ggcaaagcacagctggttattaatacgttaaccaagggaaaacagcctgaacgtgatggc
tttagaattcgtcgtgagtcggttgaaaatgggattccttgcatgacttccttggatacg
gccaatgccattttaacagtactggaatcgctaacgttttcgacaactaaaatgaaccat
atgcaaacagccaaggaggcaatcagcttatga
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