Plasmodium reichenowi: PRSY57_0216900
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Entry
PRSY57_0216900 CDS
T08079
Name
(RefSeq) replication factor C subunit 2, putative
KO
K10755
replication factor C subunit 2/4
Organism
prei
Plasmodium reichenowi
Pathway
prei03030
DNA replication
prei03410
Base excision repair
prei03420
Nucleotide excision repair
prei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PRSY57_0216900
03410 Base excision repair
PRSY57_0216900
03420 Nucleotide excision repair
PRSY57_0216900
03430 Mismatch repair
PRSY57_0216900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prei03032
]
PRSY57_0216900
03036 Chromosome and associated proteins [BR:
prei03036
]
PRSY57_0216900
03400 DNA repair and recombination proteins [BR:
prei03400
]
PRSY57_0216900
DNA replication proteins [BR:
prei03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PRSY57_0216900
DNA Replication Termination Factors
ELG1-RFC complex
PRSY57_0216900
Chromosome and associated proteins [BR:
prei03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PRSY57_0216900
DNA repair and recombination proteins [BR:
prei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PRSY57_0216900
Check point factors
HRAD17(Rad24)-RFC complex
PRSY57_0216900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_30
Rad17
AAA_lid_RFC1
RuvB_N
AAA_19
AAA_22
AAA_11
DEAD
SLFN-g3_helicase
AAA_23
nSTAND_NTPase5
AAA_14
AAA_28
nSTAND3
KTI12
RNA_helicase
AAA_16
AAA_assoc_2
FtsK_SpoIIIE
DUF2247
Viral_helicase1
AAA_5
bpMoxR
PIF1
ResIII
AAA_7
TIP49_C
MeaB
DUF815
Mg_chelatase
DNAX_ATPase_lid
AAA_18
SNF2-rel_dom
ABC_tran
TniB
VapE-like_dom
AAA_2
RsgA_GTPase
nSTAND6
NPHP3_N
AAA_33
Motif
Other DBs
NCBI-GeneID:
24529154
NCBI-ProteinID:
XP_012761057
UniProt:
A0A060RS58
LinkDB
All DBs
Position
2:607394..608386
Genome browser
AA seq
330 aa
AA seq
DB search
MENIPWVEKYRPKRLDDIVHQNNAVMMLKEVVRTKNMPHLIFHGPPGTGKTSAINALAHE
LFGKENISERVLELNASDDRGINVVREKIKAYTRISISKNKIHSETKEVLPSWKLVVLDE
ADMMTEDAQSALRRIIEIYSNVTRFILICNYIHKISDPIFSRCSCYRFQSIPINIKKEKL
LYICQNENIDIVDDALEKIIETTEGDLRRAVSILQLCSCINTKITLNSVLDVSGLPSDNI
VYKIIDACKMKDLKLVEKTVQDIIEDGFDVAYIFKSFNNYFVTNTEYEDSLKYQILLELS
RHDYRLHCGATQYIQLLSFASSVHSLLNSV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatattccgtgggttgaaaagtaccgaccaaaaaggttggatgatatcgttcat
caaaataatgctgtaatgatgttaaaggaagttgtgaggacaaagaatatgcctcattta
atatttcatggtcctcctggtacaggtaaaacatcagcaataaatgctttggctcatgaa
ttgtttggaaaggagaatataagtgagagggtattagaattgaatgcttctgatgataga
ggtataaatgtggtaagagaaaaaattaaagcatatacaagaataagcattagtaagaat
aaaatccatagcgaaacaaaagaagtattaccttcatggaaattggttgtattggatgaa
gctgatatgatgacagaagatgcacaatcagcattaagaagaataatagaaatatattct
aatgtaacaagatttatacttatatgtaattatattcataaaatatctgatccaattttt
agtagatgttcttgttataggtttcagtcaatacctattaatattaagaaggaaaaatta
ctttatatatgtcaaaatgaaaatattgatatagtagacgatgctttagaaaaaattatt
gaaacaacggaaggtgatttaagaagagcagtttctatattacaattatgttcatgtatt
aatacgaaaattacattaaattctgttttagatgtatctggattaccatcagataatatc
gtatataagattattgatgcatgtaaaatgaaagatttaaagcttgtggaaaaaacagta
caagatattattgaagatggttttgatgtagcttatatttttaaatcatttaataattat
tttgttacgaacacagaatatgaagattctttaaaatatcaaatattattagaactttcc
agacatgattatcgtttacattgtggtgccacacaatacatacaacttttaagttttgct
tcatcggtacattcgttattaaatagtgtataa
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