Plasmodium reichenowi: PRSY57_1104800
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Entry
PRSY57_1104800 CDS
T08079
Name
(RefSeq) exonuclease, putative
KO
K12618
5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
prei
Plasmodium reichenowi
Pathway
prei03008
Ribosome biogenesis in eukaryotes
prei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PRSY57_1104800
09123 Folding, sorting and degradation
03018 RNA degradation
PRSY57_1104800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prei03019
]
PRSY57_1104800
03009 Ribosome biogenesis [BR:
prei03009
]
PRSY57_1104800
03016 Transfer RNA biogenesis [BR:
prei03016
]
PRSY57_1104800
03036 Chromosome and associated proteins [BR:
prei03036
]
PRSY57_1104800
Messenger RNA biogenesis [BR:
prei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PRSY57_1104800
mRNA degradation factors
5'-3' decay
5' exonucleases
PRSY57_1104800
Ribosome biogenesis [BR:
prei03009
]
Eukaryotic type
Pre-60S particles
RNases
PRSY57_1104800
Transfer RNA biogenesis [BR:
prei03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
PRSY57_1104800
Chromosome and associated proteins [BR:
prei03036
]
Eukaryotic type
Gene silencing
piRNA pathway
PRSY57_1104800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_N
XRN_M
Motif
Other DBs
NCBI-GeneID:
24531645
NCBI-ProteinID:
XP_012763473
UniProt:
A0A151LBS4
LinkDB
All DBs
Position
11:complement(161342..164226)
Genome browser
AA seq
687 aa
AA seq
DB search
MIAFISLWVLCIINVMAYCISLNKYKFIKSYNLYSKRKHQQNVLYGIPRMYKWLTSYYPT
VREELINNEKQKSVDIFYIDMNGVIHHCTHANKEKLPIYDEHELFSNILQYLKNLFYLIK
PKKLIYIGVDGVSPKAKMNQQRKRRFLSIFKINDNDNDNTSNLFNPNCITTGTDFMYKIN
LSLNKWFKILKKKKVFEFDVIFSGSDVAGEGEHKILKYIRENCKRDSNFKNYNHCIYGLD
ADLIMLSLVTHLNNIFILRDKFKISNDLHNNMLENIERTQNTFNNDEYNSFNEPQNDNIN
YNEEGENLELHEKSKKNESLLKEENNVEYENNEEMNNDINNEMNNEINNEINNEINNSEG
MNNILGGYKIPFLPKVHKYTKEYYMKYESLNSNDFEILDIYKLRNSIKTQIATYINKLKK
EKNIVFSISRVVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILNSYIFYIYKYSNYITY
KDKVHIERLKIILKILSAQEFEYFKKRGINENISEFTDEQKYKKYYYLHKFGLEDPKEIQ
NIVKKYIEGLFWNLHYYHFGCASWYWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAFTH
LISVLPQKDKNLLPDAYKNIYVEDEVKSFFPENVKIDPNGKKETWEYIVHLPFINCNMIN
KIITEKSKTISKLKYKLRELNGREHRY
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgattgcttttatatcactatgggtattatgtataattaatgttatggcttattgtatt
agtttgaataaatataaatttataaaatcatataatttatatagtaaaagaaaacatcaa
caaaatgtattatatggaattccgaggatgtataaatggctaacttcttattacccaaca
gtgagagaagaattaataaataatgagaaacaaaaatcagttgatattttttatattgat
atgaatggagttatacaccactgtactcatgccaataaagagaagttacctatatatgat
gaacatgaactattttcaaatattttacaatatttaaaaaatttattttatttgataaag
ccaaagaaactcatatatataggtgtagatggagtgtcaccaaaagcaaaaatgaatcaa
caaagaaagaggagatttcttagtatcttcaaaattaatgataatgataatgataatacg
tctaatttgtttaaccctaattgcataacaactggaacggattttatgtataaaattaat
ttgtccttaaataaatggttcaagattttgaagaaaaaaaaagttttcgaatttgatgtt
atattttctggttcggacgtagctggggagggagagcacaaaattttgaaatacataaga
gagaactgtaagagagatagtaactttaaaaattataatcactgtatatacggactcgat
gccgatctcattatgctatcactcgtaacgcacctgaacaatatttttattttgagagat
aaatttaaaataagtaatgatttacacaataatatgttagaaaatatcgaaagaacacaa
aacacgtttaataatgatgaatataattcttttaatgaacctcaaaatgataacataaat
tataacgaggaaggagaaaaccttgaattgcatgaaaaaagtaaaaaaaacgaatctctt
cttaaagaggaaaataatgttgagtatgaaaataatgaggagatgaataatgatataaat
aatgagatgaataatgagataaataatgagataaataatgagataaataattcagaaggt
atgaacaatattttaggtggatataaaattccttttcttccaaaggttcataaatataca
aaagaatattacatgaaatatgaaagcttaaatagtaacgactttgaaatattagacata
tataaattgaggaattctattaagacacaaatagctacatatataaataaattaaaaaaa
gaaaaaaatatcgtcttcagcataagtagagtggttgatgatattgtatttttatctttt
cttgttggtaatgatttccttccccacataccaaacattgatattaatgaaggatccatg
aacgaaatcttaaattcatatatcttttatatatataaatattctaattatataacatat
aaggataaagtacacatagaacggctaaaaattattttaaaaattttaagcgctcaagaa
tttgaatattttaagaaaaggggaattaatgaaaatattagtgaatttacggatgaacag
aagtataaaaaatattattatcttcataaatttggtctagaagatccaaaggaaatacaa
aatattgtaaaaaaatatatagaaggattattttggaatttgcattactatcattttgga
tgtgccagttggtattgggaatatccataccactatgctcctctatgtagcgatttgtta
agttttgagaaatcggatttcttctttgaaaagggtaagccctattcagcttttactcat
ttgataagtgttctacctcagaaggataagaatttacttccggatgcgtacaaaaatatt
tatgtggaagatgaagtaaagtcgtttttcccggaaaatgtaaaaattgatcccaatgga
aaaaaagaaacgtgggaatatattgttcacttgcctttcataaactgcaatatgattaac
aaaatcataacagaaaaaagtaaaacgatctccaagttgaaatacaaattaagggaattg
aatggaagagaacacagatattaa
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