Plasmodium reichenowi: PRSY57_1471900
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Entry
PRSY57_1471900 CDS
T08079
Name
(RefSeq) DNA-directed RNA polymerase, alpha subunit, putative
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
prei
Plasmodium reichenowi
Pathway
prei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PRSY57_1471900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prei03021
]
PRSY57_1471900
03400 DNA repair and recombination proteins [BR:
prei03400
]
PRSY57_1471900
Enzymes [BR:
prei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PRSY57_1471900
Transcription machinery [BR:
prei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PRSY57_1471900
DNA repair and recombination proteins [BR:
prei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PRSY57_1471900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
24533980
NCBI-ProteinID:
XP_012765769
UniProt:
A0A151L5Y7
LinkDB
All DBs
Position
14:2916141..2918738
Genome browser
AA seq
865 aa
AA seq
DB search
MPFLVFISLWLHTIIVIYKCVHIFKSSYISSAGKLLMFERKNKRGKIKLILNKNKEEKNI
RRESLKKYIVHSTDNDKEFIHINDNYKIFQKKNFIKKYHVKDEEIKEYLEQINNNRASGY
EPKFPEETFRTPDGLTNIILDYKYKNDNLKIHNYYYFFLYFLKKLRDEEKRKIKLRKRME
GKNDEYGDSINDDDDLDNRMINVQEFLFLKKKGFFEGELYTWKNWVLLNRGEWRDTIVYG
DEDDNNCGNNSNSNSNSSSNINSNSSSNNNSNSSSNNNSNSSSNINSNSNSSSNFYGDDN
IYNVYNNYHNERYDIKTLRPLVEPKMKRMPIEYWGSFRAIDFNVNHYPIYKKLFDYFNKV
NVNENDETGKFYPFLFFPRFGIGRDRLGLGYGDAQYFGNYGDFYEKRKEREERLRKRNIE
MQLKGNDNDKYDMNIIDNKCSEKILNTNIHKEIFIDKDDFGPNFIKIEEATDIIKYPQNG
KLYQKFYLGPLNITDGHTFGSLIKYVCQTQIYGYAIVAIKVHNMNEDTKINNVQEDLLEI
ALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFID
ISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVNKNYMPISSSFGACRMIRLT
VHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNIKKILRKFREMIIKD
TDFTFQEEEQEIKNLWPAIDKYKYLQTRQKMEGGPPIHNIDEDVLSEQIQKNKSLDPFSQ
ELMNPDNFPKHSNIQLPIQDTPPPFLDTLEWLKMELKKENNKNNITQCKNTKWKETKNKD
KFNKKRTFDYDEYLNHRLSDILNEK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttctcgtttttatttctttatggttacatacaataatagtaatatataaatgt
gtacatatttttaaatcttcatatatttccagtgctggaaaattgttaatgtttgaaagg
aaaaataaaagaggaaagataaaattgattttaaataaaaataaagaagaaaaaaatata
agaagagaatcattaaagaaatatattgttcattccactgacaatgataaagagtttata
catataaatgataattataaaatatttcaaaaaaaaaattttattaaaaaatatcatgtg
aaggatgaagaaataaaagaataccttgaacaaataaataataatagagctagtggttat
gaacctaaatttcctgaggagacctttcgaacgcctgatggattaacaaatataatatta
gattataaatataaaaatgataatttaaaaattcataattattattattttttcctttat
tttttgaagaaattacgtgatgaggagaaaaggaaaattaaattaaggaaaagaatggaa
gggaagaacgatgagtatggtgatagtattaatgatgatgatgatcttgacaatcgtatg
ataaatgttcaggagtttttatttttgaagaagaaaggttttttcgagggtgagttatat
acatggaaaaattgggttctgttgaataggggtgaatggagagataccatagtttatggt
gatgaggatgataataattgtggtaataatagtaatagtaatagtaatagtagtagtaat
attaatagtaatagtagtagtaataataatagtaatagtagtagtaataataatagtaat
agtagtagtaatattaatagtaatagtaatagtagtagtaatttttatggtgatgataat
atatataatgtatataataattatcataacgaacgatatgatataaaaactttgagacct
ctggtagaaccgaaaatgaaaagaatgcccattgaatactggggaagttttcgagctatc
gattttaatgtgaatcattatccaatatataaaaaattatttgattattttaataaagtg
aatgtaaatgaaaatgacgagacgggaaaattttatccttttttattttttcctcgtttt
ggtattggtagagataggttaggattaggttatggtgatgctcaatattttggtaattat
ggagatttttatgaaaaaaggaaagaaagagaagaaagattaagaaaaaggaatatagag
atgcaattaaaaggaaatgataatgataaatatgatatgaatataatagacaataaatgt
tctgagaaaatattaaatacaaatatacataaagaaatttttatagataaagatgatttt
ggaccgaattttataaagattgaagaagcgactgatataataaaatatccacaaaatggt
aaattatatcagaaattttatttgggacctttaaatataacagatggacatacatttggt
tctttaataaaatatgtttgtcaaactcagatttatggatatgctatcgtcgctataaaa
gttcataatatgaatgaagatactaaaataaataatgtacaagaagatttattagaaatc
gcattaaatatatctgatgtatgtatatatagtaaagaaataaatttagagtctaatatt
agattaatttttaaaggacctttaatgttagttgctggtatgataccgttaccttcacat
ttaaaaataataaataaagaacattatatatgtacgataaaagaagatggatttatagat
atatctataaagatagaatatggtaaaggacattggttaacatatgataaaggattatat
aaaagagaacgaggatcagataatgattgtatgaaaaaaagagaaattaaggaagtagta
aataaaaattatatgcctattagttctagttttggtgcatgtagaatgataagattaact
gttcataaaattgctacaaaattctggtgtgaagacagatgtgaatttacagatccaaaa
caaatgttagttgtagaaatatggacagattgtagaatgttaccaaaaaatgttctttta
tatggaattaaaaatattaaaaaaatattaaggaaatttagggaaatgattataaaagat
accgattttacatttcaagaggaagaacaagaaattaaaaatttatggccagctattgat
aaatataaatatttgcaaactcgacaaaaaatggaaggaggaccacctatacataatatt
gatgaagatgttcttagtgaacaaatacaaaaaaataaatcacttgatccattttctcaa
gaactaatgaatccagataattttccaaaacattcaaatatacaattacctatacaagac
acaccaccaccttttctagatacattggaatggttaaaaatggaactcaagaaggaaaat
aacaagaataatataacacaatgcaaaaatacaaaatggaaagaaacaaaaaataaagat
aaatttaataaaaagagaacatttgattatgatgaatatttaaatcatcgtttatcagat
atattaaacgaaaaataa
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