Poecilia reticulata (guppy): 103467129
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Entry
103467129 CDS
T05149
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103467129 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pret03400
]
103467129 (xpc)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103467129 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
103467129
NCBI-ProteinID:
XP_008411442
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Position
LG7:complement(9264085..9272681)
Genome browser
AA seq
930 aa
AA seq
DB search
MARRGKCAETEADTKKPKQVLNAAGRGAKTRGRKKAPENDPAEKEEKLERKVNPKPRMPS
KRAAQNKSSPTTNTSSDSKTSKYFQSPSKEEVKSEDDFEMPTAAPPVVKKSTKKPEEEEE
KEEEEEDDSEDEDDWEEVEELAEPLGPAETPEPVLPSQPVEIEIETAEVRKQKKRQAEFE
TYLRRMMKRFKKDLVIDTHKVHLLCLLANGMFRNRLCSEPDLLAVALSLLPPHFCTVARQ
RIDQNYLSGLLKWFSATFTLDPSLPTEERPDPQALLERRLGSLSARDHQEMTHLFLLFLR
SLQLFCRLVLSLHPVPFKPPSSKSKGARTSTGAPERCQSSQESSKSNSPEAKVSPGTKRP
AQGEKVKGSSGGKKAKRKEMKEEKEEKPVLSGGQRPKNSKRRSVASKVSYKEESNSEADE
EEEEEASDAEKYQESSEDDFESSTKPERKRTGNRKSSEKTSRTQGARKRRRTGGKNEDGE
WEEGKEEDDEDEGATSNRVKRRSGQRKDGPGADEWLEVYLDKSSAWVCIDVEHGVGVPHL
CSQNATAPLTYVVAVDGDGFLKDLGRKYDPTWMTASRKRRVDDEWWEDTLEPFLGPEDER
DKREEKELQSKLLNKPMPTSIAEYKNHPLYALKRHLLKYEALYPPTAAVLGYCRGEPVYS
RDCVHTLHSRETWLKEARTVRLGEEPYKMVKGFSNRSRKARMMSEMKNVNDLPLFGEWQT
EEYQPPIAVDGKVPRNDYGNVYMFKACMIPVGCVHLRLPNLHRVARKLDLDAAPAVTGFD
CHGGYSHAVTDGYIVCEEDEEVLRAAWVEEQEIQKQKEKEKKEKRAIASWTLLVKGLLIR
ERLKQRYSQRSQGLGSLAPGEEAGGFSSDEDGVEVDSPAAKTASETLVLSWPQNRQAEED
AGPGKQKKKKTTTKREKKGQEKHLFPFEKV
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcggggaaagtgtgcagagacggaggccgatacaaagaagccgaagcaggtg
ctgaacgcagcaggcagaggagcaaagacgagaggcaggaagaaagctccagaaaatgat
cccgcagaaaaagaggagaagcttgagaggaaggtcaaccccaaaccacgtatgccttca
aaacgtgcagcgcagaataaatcctctccaaccaccaacaccagctctgacagtaaaacc
agtaagtacttccagtctccgtccaaggaggaggtcaaaagtgaagacgactttgagatg
ccgactgctgcgccacccgtagttaagaagagcaccaagaaaccagaggaggaagaagaa
aaagaggaggaggaagaggatgatagtgaggatgaggatgactgggaggaagtggaagag
ctggccgagccactgggtccggctgaaacaccagaacccgtcctgccgtctcagcctgta
gagatcgagatcgagaccgcagaagtcagaaagcagaagaagaggcaggcggagtttgag
acgtacctcaggcgaatgatgaagcggttcaagaaggacctggtgatagacacacacaag
gtccacctcctgtgccttctagctaacgggatgttccgcaacaggctgtgcagcgaaccg
gacctgctggctgtcgctctgtctctgctgcccccgcacttctgcacggtggcgaggcag
cgcattgaccagaactacctctctggactcctcaagtggtttagcgcgaccttcaccctc
gaccccagtcttcccactgaggagcgtccggaccctcaggctctcctggagagacgactg
ggaagcctctcagccagagaccatcaggagatgactcatcttttcctgttgttcctgagg
tctctgcagctcttctgccgactggttctttctctgcacccagttcctttcaagcctcca
tcctcaaagtccaaaggggctagaacatcaactggagccccagaacgttgccagtcgagc
caggaaagctccaagagcaactctcctgaggcaaaagtttctccaggcaccaagagacca
gctcaaggtgagaaagtcaaagggagcagcggaggcaagaaagcaaaaaggaaagaaatg
aaggaggagaaagaggagaagcccgtgttatctggaggccagagaccaaaaaactccaaa
cgccgcagcgtcgcctcaaaggtcagctacaaagaggagagcaacagtgaggcagatgag
gaagaagaagaggaagctagtgacgccgagaaatatcaggaatccagcgaggacgatttt
gaatccagcaccaaacctgagagaaagaggacagggaacagaaagagctctgagaagacc
tcaagaacccaaggcgctcgaaagagaagaagaaccggcgggaaaaacgaggacggtgag
tgggaggagggtaaagaggaggatgatgaagacgaaggcgctacgagcaacagagtgaag
agacggagcgggcagaggaaagacggacccggagcggacgagtggttggaggtctacctg
gacaaatcgtctgcatgggtgtgcatagacgtggagcacggagtcggagttccccacctc
tgctcgcagaacgccaccgcgccgctgacctacgtggtggcagtggacggagacggcttc
ctgaaggacctgggcaggaagtatgaccctacctggatgacggcgtcccggaagaggcgg
gtggacgatgagtggtgggaggacacactggagccgttcctgggcccagaggacgagcgg
gacaaaagggaggagaaggagctccagagcaagctgctgaacaaacctatgccgacctcc
atagcggagtataagaaccatcctctgtacgccttaaagagacacctgctgaagtacgag
gccctctatcctcccacagccgccgtgctcggatactgcagaggagaaccggtgtactcc
agagattgtgtgcacaccctccactccagagaaacctggctgaaggaagctagaaccgtc
cgacttggagaggagccgtacaagatggtgaaaggcttctccaaccgttccagaaaggcc
aggatgatgtccgagatgaagaacgtgaatgaccttcctctgtttggagaatggcagact
gaagaataccagccacccatagctgtggatgggaaggtcccccgtaatgattacggtaac
gtctacatgtttaaagcctgtatgatcccagtgggctgcgttcacctgaggctgcccaac
ctgcaccgcgtggctaggaagctggacctggatgctgcgcccgcggtcacaggattcgac
tgccacggaggatactcacacgctgtgactgatggttacatagtgtgtgaagaggatgag
gaggtcctccgagctgcctgggtggaagagcaggagattcagaaacagaaggaaaaagag
aaaaaggagaagagagcgatcgccagctggactctgctggtgaagggactcctgatcaga
gagaggctgaagcagcgctacagtcagaggagccagggcctggggagcctcgctcccgga
gaggaagctggaggtttctcctctgatgaggacggggtcgaagtggattctcccgcagcc
aaaacggcatctgagactctggtgctgtcctggccccaaaacagacaagcagaggaggac
gcaggtccaggcaaacagaagaagaagaagacgacgactaagcgagagaagaagggtcaa
gagaaacatttatttccttttgagaaagtttaa
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