Pseudomonas rhizosphaerae: LT40_11145
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Entry
LT40_11145 CDS
T03339
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh01501
beta-Lactam resistance
prh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT40_11145
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LT40_11145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prh02000
]
LT40_11145
01504 Antimicrobial resistance genes [BR:
prh01504
]
LT40_11145
Transporters [BR:
prh02000
]
Other transporters
Pores ion channels [TC:
1
]
LT40_11145
Antimicrobial resistance genes [BR:
prh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LT40_11145
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LT40_11145
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LT40_11145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Sec8_N
Secretin_N_2
Motif
Other DBs
NCBI-ProteinID:
AIS17907
UniProt:
A0A089YU64
LinkDB
All DBs
Position
complement(2452171..2453610)
Genome browser
AA seq
479 aa
AA seq
DB search
MTDSVLPRASRLASLALCSLMLGACTLGPDYQRPTIATPVQFKQAEGWRQANPSDALARG
AWWELYGDRQLDALVLRLNRSNQTVAQYEAQYRQAQALVRSTRGALFPTVDLSAGKTRSS
QGTGSSGSSLSQSSSGIRDTYNTQLGVSWEADIWGKLRRGLEADRASAQASLADLAAMRL
SLQSELVQNYLQLRVIDEQKRLLEATVQAYQRSLDLTQNQYRAGISGKDAVFLAQTQLKT
TQADLIDLVWQRAQLENAIAVLIGMAPAEFSLAASTEIPALPAIPLAVPSQLLERRPDIA
AAERSMMAANAEIGVAKTAYYPDLTLSLAGGYSSSSFSNWVSLPNRFWSVGPQLAMTLFD
GGQRAAEVDRSEAAYDQTVAQYRQTVLDGFREVEDYMSQLKVFDEEALVRNEALQAARES
LRLTSNQYKAGLIGYLDVVNVQATALSNERSVLTLMQSRLVASVQLIAALGGGWQEPAQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattccgttttaccccgcgcttcgcgcctggccagcctggcgttgtgcagcctg
atgctgggtgcctgtaccctgggcccggactaccagcgtccgacgatcgccacgccggtg
caattcaagcaggccgagggctggcgccaagccaaccccagcgacgccttggcgcgcggc
gcctggtgggagctgtacggcgaccgccagctcgacgccctggtgctcaggctcaaccgg
tccaaccagaccgtcgcccagtacgaagcgcagtaccggcaggcccaggcactggtgcgc
agcacccgcggcgcgctctttccgactgtcgatctgagcgctggcaagacccgctccagc
cagggcaccggcagcagcggttcgagcctgagccaatccagcagtggcatacgcgacacc
tacaacacgcagctgggcgtgagctgggaagccgatatctggggcaagctgcgccgtggg
cttgaggcggatcgcgccagtgcgcaggcgagcctggcggatttggcggcgatgcgcctg
agcctgcaatcggagctggtgcagaactatctgcaactgcgggtgatcgacgagcagaag
cgcctcctcgaagcgaccgtccaggcctatcagcgctcgctcgacctgacccagaatcag
taccgcgcgggcatttccggcaaggatgcggtgttcctggcgcagacccagttgaagacc
acccaggccgacctgatcgatctggtctggcagcgggcgcagctggaaaatgccatcgcc
gtgctcattggcatggcaccggccgaattcagcctggccgccagcaccgagattccggcg
ttgccggcaatccctctggcggtgccttcgcaattgctcgagcgacgacccgacatcgcc
gccgccgaacgctcgatgatggccgccaacgcggaaatcggcgtggccaagacagcctat
tatcccgacctgaccttgagcctggccggcggctacagcagtagcagtttcagcaattgg
gtgtcgttgcccaaccgtttctggtcggttggcccgcagttggcgatgaccctgttcgat
ggcggccagcgcgccgctgaagtggaccgcagtgaagcggcttacgaccagaccgtcgcg
cagtatcgtcagaccgtgctcgacgggttccgtgaagtcgaagactacatgagccagttg
aaggtgttcgacgaggaagcgttggtgcgcaacgaggcgctgcaggcggcccgcgagtcg
ttgcgcctcacgtccaaccaatacaaggccgggcttattggctatcttgacgtggtcaac
gtgcaggcaacggcgttgagcaacgagcgcagcgtgttgaccctgatgcagagtcgcctg
gtcgccagcgtgcagttgatcgcggcgctgggcggcggctggcaggaaccggcacaatag
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