Pseudomonas rhizosphaerae: LT40_14415
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Entry
LT40_14415 CDS
T03339
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00260
Glycine, serine and threonine metabolism
prh01100
Metabolic pathways
Module
prh_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LT40_14415
Enzymes [BR:
prh01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
LT40_14415
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
LT40_14415
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_8
HI0933_like
DAO
Pyr_redox_3
FAD_binding_3
Pyr_redox
Thi4
AlaDh_PNT_C
Lycopene_cycl
DDR1-2_DS-like
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AIS18513
UniProt:
A0A089YPZ8
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Position
complement(3194298..3197315)
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AA seq
1005 aa
AA seq
DB search
MSQVNRLSNGGRLDRSKKLTFTFNGTTYVGYEGDTLASALLANGVDVIGRSFKYSRPRGI
VAAGAEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPNVNTDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTEVDPDSYDYMSRTCDVLVVGAGP
AGLSAALAAARSGARVILADEQEEFGGSLLDTRESLDGQPAGEWVKAVIAELQGLPDVTL
LPRATVNGYHDHNFLTIHQRLTDHLGDRAPMGQVRQRMHRVRAGRVVLATGTHERPLVYG
NNDVPGNMLAGAISTYVRRYGVAPGKKLVLSTNNDHAYRVALDWYDAGLKVVAVADARHN
PRGALVEEARAKGIRILTSSAVIEARGSKHVTAARVAAIDVRAHKVASPGEWLDCDLIGS
SGGYSPVVHLASHLGGKPIWREDILGFVPGEAPQKRVCVGGVNGVYALADAMADGFEGGA
RAASETGFGIVEGTLPKVLNRAEEPTLALFQVPHDKDTARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVTIPEMGTTMFRPNYTPITF
GAVAGRHCGHLFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPKRGEDIHSAVARECKA
VRDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKL
LAEVTNIDLDKDAFPFMTWKEGQVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIIE
AGKQYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDTVREERKQLVGLKPIDPNKWLPEGAQLVFDPKQAIPMSMVGHVTSSYASNSLGYSF
AMGVVKGGLKRMGERVFSPQADGSVIEAEIVSSVFFDPKGERQNI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggtcaatcgcctgtccaacggcggacgtctggaccgcagcaagaagctgacc
ttcaccttcaacggtacgacctacgtcggctatgaaggcgacaccctggcctcggcattg
ctcgccaacggcgtcgacgtgattggtcgcagcttcaagtattcgcgtccgcgcggcatc
gttgccgctggcgccgaagagcccaatgcggtgctgcagatcggcgctaccgaggccacc
cagattcccaacgtgcgcgccacgcagcaggcgctgtaccagggcctggtcgcgaccagc
accaacggctggccgaacgtcaacaccgacatgatgggcatcctgggcaaggtcggcggc
aaactgatgccgcccggcttctactacaagaccttcatgtacccgcagtccttctggatg
acctacgagaagtacatccgcaaggccgccgggctgggccgttcgccgaccgaagtcgac
cccgattcctacgactacatgagccgcacctgcgatgtgctggtggtcggcgctggcccg
gccgggctgtctgccgccctggccgcggcgcgcagcggtgcgcgagtgatcctggccgac
gagcaggaagagttcggcggctcgctgctcgatacccgcgagagcctggatggccagccg
gccggtgaatgggtgaaagcggtcatcgctgagctgcaaggtttgccggacgtaaccttg
ctgccccgtgccacggtcaacggctatcacgaccacaatttcctgaccattcatcagcgc
ctcaccgaccacctcggcgaccgtgcaccgatgggccaggtgcgccagcgcatgcaccgg
gttcgcgccgggcgcgtggtgctggccaccggcacccacgagcggcccctggtgtacggc
aacaacgacgtgccgggcaacatgctggccggcgccatttccacctacgtgcgccgctac
ggcgtggcaccgggcaagaagctggtgctgtcgaccaacaacgaccacgcctaccgcgtg
gccctggactggtacgacgccggcctcaaggtcgtcgccgtggccgatgcccggcacaac
ccgcgtggtgcgctggtcgaggaagcccgcgccaagggcatccgtatcctgacgtccagc
gcggtgatcgaagcccgtggcagcaagcacgtcacggcagcgcgcgtcgccgccatcgac
gtcagggcacacaaggtggccagccccggcgagtggctcgactgcgacctgatcggcagc
tcgggcggctacagcccggtggtccacctggcctcgcacctgggcggcaaaccgatctgg
cgtgaagacatcctcggcttcgtgcctggcgaagccccgcagaaacgcgtgtgcgtgggc
ggcgtgaacggcgtgtatgccttggccgacgccatggccgacggtttcgaaggcggtgcc
cgggcagcgtccgagaccggtttcggcatcgtcgaaggcaccctgcccaaggtcttgaac
cgtgccgaagaaccgaccctggcgttgttccaggtcccccacgacaaggacacggcgcgt
gcgcccaagcagttcgtcgacctgcagaatgacgtcaccgcggctgccatcgaactggcc
acccgcgagggcttcgagtcggtcgagcacgtcaagcgctacaccgcgctgggcttcggt
accgaccagggcaagctgggcaacgtcaacggcctggccattgccgcccgttcgctgaac
gtcaccattccggaaatgggcaccaccatgttccgccccaactacacgccgatcaccttc
ggtgcagtagccggccgccactgtggtcacctgttcgagccggtacgtttcaccgcgctg
catgcctggcatgtgaagaacggtgccgagttcgaagacgtcggccaatggaagcgcccc
tggtacttccccaagcgtggcgaggacatccattccgccgttgcccgcgaatgcaaggcg
gtgcgcgacagcgtcggcctgctggacgcctcgaccctgggcaagatcgacatccagggt
ccggacgcgcgcgaattcctcaaccgcatctacaccaacgcctggaccaaactggacgtg
ggcaaggcacgctacggcctgatgtgcaaggaagacgggatggtcttcgacgacggcgtc
accgcctgtctggccgacaatcacttcctgatgaccaccaccaccggcggtgccgcccgt
gttctgcaatggttggagatctaccagcaaaccgagtggccggacctgaaggtgtacttc
acctcggtcaccgaccattgggcgaccttgaccctgtcgggccccaacagccgcaaactg
ctcgctgaagtgaccaatatcgacctggacaaggacgctttcccgttcatgacctggaag
gaagggcaggtagcgggtgtgccggcacgggtgttccgcatctccttcaccggcgagctg
tcgtacgaggtcaacatccaggccgactacgccatgggcgtgctggaaaagatcatcgag
gcgggcaagcagtacaacctgacgccgtacggcaccgaaaccatgcacgtgctgcgcgcc
gagaagggtttcatcatcgtcggccaggacaccgatgggtcgatgactcccgacgacctg
aacatgggctggtgcgtcggccgaaccaagccgttctcgtggatcggctggcgcggcatg
aaccgcgaagacaccgtgcgcgaggaacgcaagcagttggtgggcctcaagccgatcgat
ccgaacaaatggctgcccgaaggtgcccagttggtgttcgaccccaagcaggcgatcccc
atgagcatggtcggccacgtgacgtcgagctacgccagcaactcgctgggttactcgttc
gccatgggcgtggtcaagggcggcctcaagcgcatgggcgagcgggtgttctcgccccag
gccgatggcagcgtgatcgaagctgaaatcgtttcttcggtgttcttcgatccgaagggc
gagcggcagaacatctaa
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