Pedobacter riviphilus: H9N25_12290
Help
Entry
H9N25_12290 CDS
T08657
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
prk
Pedobacter riviphilus
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
prk03110
]
H9N25_12290 (clpB)
Chaperones and folding catalysts [BR:
prk03110
]
Heat shock proteins
HSP100
H9N25_12290 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
NACHT
IstB_IS21
AAA_14
Mg_chelatase
RuvB_N
AAA_18
AAA_7
Zeta_toxin
AAA_24
Torsin
AAA_3
ResIII
ATPase_2
AAA_25
T2SSE
AAA_28
NBD_SMAX1
DNA_pol3_delta2
PreP_C
Motif
Other DBs
NCBI-ProteinID:
QNR82777
UniProt:
A0ABX6TBF3
LinkDB
All DBs
Position
2984823..2987423
Genome browser
AA seq
866 aa
AA seq
DB search
MNFNNFTIKAQEAVQQASEIAQGNQQQAIETAHLLKGLLTVDENVVSYVLKKLNVNLNSL
NQNLDAEIAKFPKVSGSNVYLSSNANSVLQKAQTFLKEFKDEFVSVEHLLLSILAVNDST
SKLLKEQGVNEKDLKKAIIELRGDNRVTDQNAEATYQALSKYARNLNEYAESGKLDPVIG
RDEEIRRVIQILSRRTKNNPILIGEPGVGKTAIAEGIAFRIIKGDVPENLKSKVVYSLDM
GALIAGAKYKGEFEERLKAVVKEVTQSDGDIILFIDEIHTLVGAGGGEGAMDAANILKPA
LARGELRAIGATTLDEYQKYLEKDKALERRFQKVMVEEPDTQDAISILRGLKERYETHHK
VRIKDEAIIAAVEMSQRYISDRFLPDKAIDLMDEAASKLRMEMDSVPENVDALDREIMRL
EIEREAIKREKDDRKVKELSEEIANLSAERDEFKAKWQGEKDLVDAVNNELEQIEHYKLE
AEQAERAGDYGKVAEIRYGKIKEAQDKVEKLKADLESQQSNSRMLKEEVTADDIAGVVGR
WTGIPVTKLIASEREKLLHLEEELHQRVAGQDEAIEAISDAIRRSRAGLQDKRKPIGSFI
FLGTTGVGKTELAKALAEFLFNDENALTRIDMSEYQERHAVSRLIGAPPGYVGYDEGGQL
TEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNIGA
HLIQDNFKNLSDENREEVIAKTKNELFEVLKQTIRPEFLNRIDELIMFTPLNRSEIRNIV
SLQFKHVQQTLAEMGIEMEASDEALDWLAQLGYDPQFGARPLKRVIQKRILNELSKEILA
GKIDKDSKIKLDMFDHNFVFLNQKAD
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaacaattttactataaaagcccaggaagcagttcaacaggcttctgaaata
gcccaaggcaatcagcaacaggctattgaaacggcacacctgcttaaaggtttgcttact
gttgatgaaaacgtggtttcttatgttttaaagaaattaaacgtcaatctaaattcatta
aatcaaaatttagatgcagaaattgccaagttcccaaaagtgagtggaagcaatgtctat
ctgtcatctaacgcaaatagcgttttacaaaaagcgcagacgtttttaaaagagtttaaa
gatgaatttgtatctgtagagcatctattattgagtatcttagccgttaacgatagtact
tctaaattattaaaagaacagggtgttaacgaaaaagatcttaaaaaagccattattgag
ctgcgtggagataaccgtgtaaccgatcaaaatgccgaggccacctatcaggccctgagc
aaatatgcaaggaatttaaacgaatatgcagaaagcggaaaactagatcctgtaattggg
cgcgatgaggaaatccgtcgggtaatacagattttatcgcgcagaaccaagaacaaccct
attttaattggcgaacctggtgtaggtaaaaccgccattgccgaaggaattgcttttagg
attattaaaggtgatgtacctgaaaacttaaaaagcaaagtggtttattcactagatatg
ggtgctttaattgcaggagcaaaatacaaaggcgaatttgaagagcgtttaaaagccgta
gttaaagaagttacccaaagcgatggtgatattatcctgtttatcgatgagatccacact
ttggtaggtgctggtggcggtgaaggtgctatggacgcagcgaatattttaaaacctgcc
cttgcccgtggagaactacgtgccattggtgcaacaactttagatgaatatcaaaaatat
ttagaaaaagataaagcgttagaacgccgtttccaaaaggtgatggttgaagaacctgat
acccaggatgcgatttctatcctccgtggcttaaaagaacgttatgaaacacatcataaa
gtaaggattaaagatgaagcaattatcgcagccgtagaaatgagtcagcgatatatttca
gaccgtttcttgccagataaggccatcgatttaatggatgaagctgcatctaaattgcgc
atggaaatggacagtgtgcccgaaaatgtggatgctttagaccgagaaattatgcgttta
gaaattgaacgtgaagcaattaaacgtgaaaaagacgataggaaggttaaagaactttca
gaagaaattgctaacctatcagcagagcgtgatgaatttaaagcgaaatggcaaggtgag
aaagacttggtagatgccgtaaataacgaactggagcaaattgagcactacaaattagaa
gcagaacaagctgaacgtgcaggcgattacggtaaagttgccgaaatccgttacggaaaa
attaaggaagcccaagataaggttgaaaaacttaaagccgatttagaaagccagcaaagc
aatagccgtatgcttaaggaagaggttactgctgatgatattgcaggtgtggtaggccgt
tggacaggtattccggttacgaaactgattgccagtgagcgcgaaaaactgcttcattta
gaagaagaattacaccagcgtgtggctggtcaggacgaagcaattgaagctatttctgat
gccatccgccgatcgcgtgcaggcttacaggataaacgcaaaccaattggatctttcatc
tttttaggtactactggtgtaggtaaaacggagcttgcaaaagcccttgcggaattttta
ttcaacgatgaaaatgccttaacccgcatcgatatgagtgaatatcaggagcgtcatgcc
gtatcgcgcttaattggagcgcctccaggatatgtgggttacgatgaaggcgggcaatta
accgaggccgttaggcgtaaaccttattcggtagtattgcttgatgagattgaaaaagca
catccggatgtatttaacatcctgttacaggtattagatgacgggcgtttaaccgacaat
aaaggtagaacggtgaattttaaaaataccatcatcatcatgacctcaaacattggtgcg
catttaattcaagataatttcaaaaacttaagcgatgaaaaccgtgaggaagtaattgca
aaaaccaaaaacgaattgttcgaggtattaaaacagaccattcgcccagaatttttgaac
aggattgatgagctgattatgtttaccccgttaaaccgcagcgaaatcagaaatattgta
agcttacagtttaaacatgtacagcaaacattggccgaaatgggtatagaaatggaagcc
agtgatgaagctttagattggttggcacaattgggttacgatccgcaatttggtgctaga
ccgttaaaaagagtgattcaaaaaagaatcttaaatgagttgtcgaaagagatattggcg
ggtaagatagataaagacagcaaaattaagttagatatgttcgatcataattttgtgttc
ctgaaccaaaaagctgattaa
DBGET
integrated database retrieval system