Pedobacter riviphilus: H9N25_22005
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Entry
H9N25_22005 CDS
T08657
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00020
Citrate cycle (TCA cycle)
prk00190
Oxidative phosphorylation
prk00650
Butanoate metabolism
prk01100
Metabolic pathways
prk01110
Biosynthesis of secondary metabolites
prk01120
Microbial metabolism in diverse environments
prk01200
Carbon metabolism
Module
prk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
prk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
H9N25_22005
00650 Butanoate metabolism
H9N25_22005
09102 Energy metabolism
00190 Oxidative phosphorylation
H9N25_22005
Enzymes [BR:
prk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
H9N25_22005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
NAD_binding_8
GIDA
Pyr_redox
HI0933_like
AlaDh_PNT_C
FAD_binding_3
Thi4
PALP
FAD_oxidored
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
QNR84542
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Position
5333651..5335630
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AA seq
659 aa
AA seq
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MSDINSNIPEGELTSKWTKYKSSVPLVNPSNKRTIEVIIVGSGLAGASAAATLAEMGYKV
KCFCFQDSPRRAHSIAAQGGINAAKNYQNDGDSVYRLFYDTIKGGDYRAREANVHRLAEV
SANIIDQCVAQGVPLAREYGGLLDNRSFGGTQVQRTFYAAGQTGQQLLLGAYSALERQIG
MGKVEMYTRHEMLEVVKIDGKARGIIARNLITGEIERHFGHAVVLGTGGYGNVFYLSTNA
MGSNVTAAWKAHKQGAYFANPCYTQIHPTCIPVSGDHQSKLTLMSESLRNDGRIWVPKKK
DDNRKASEIPEDERDYYLERRYPAFGNLVPRDVASRAAKERCDAGYGVGASKLAVYLDFK
ANTERYGKIEAAKAGNHNPDKETCMRLGTAVIKEKYGNLFDMYAQITGENPYETPMRIYP
AVHYTMGGLWVDYNLMTSVPGLYCTGEANFSDHGANRLGASALMQGLADGYFVLPYTIGA
YLSKEISVKAIPTDHPAFVEAEERAVGILNTLINIKGTKSVDHFHKRLGHIMWEKCGMAR
NEKGLKEAIEEIRALRAEFWSDVRVPGTADELNTELEKAGRVADFIELGELMCIDALNRN
ESCGGHFREEYQTEEGEALRDDENYSYVAAWEFKEGVNFELHKEELKFENIKVAQRSYK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattaattcaaatattccagaaggcgaattaaccagcaaatggacaaaatat
aagtcttctgtgcctttggttaacccatcgaacaaaagaactattgaagtaatcatagta
ggttcgggtttagcaggtgcttcggcagcggctacgttggccgagatgggttacaaggta
aaatgtttctgttttcaggattcaccacgtagagcacactcaattgctgctcagggtggt
atcaatgcagcaaaaaactatcagaatgatggtgatagcgtttatcgccttttctacgat
acaattaagggtggcgattatcgtgcccgcgaagctaacgtacaccgtttagccgaagta
agtgccaacattatagatcagtgtgtagcacaaggtgtgcctttagcgcgtgaatatggt
ggtttgttagataaccgttctttcggtggtacacaggtacaacgtactttctatgctgca
ggtcaaactggacaacagttattattaggtgcctattctgctttagaacgccagattggt
atgggtaaagtagaaatgtatacccgccacgaaatgcttgaggtggttaaaatcgatggc
aaagcgcgtggtattatcgcacgtaacttaattacaggagaaatcgaacgtcatttcggt
catgcggtggtattaggaacaggtggttacggtaacgtattctatctttctaccaacgcg
atgggaagtaatgttactgcggcctggaaagcgcataaacaaggtgcttattttgcaaac
ccatgttatacgcagatccacccaacttgtatcccggtttctggcgatcaccaatctaaa
ttaaccctaatgtctgagtcgttgcgtaacgatggacgtatttgggttcctaaaaagaaa
gatgataaccgtaaagcttcagaaattcctgaagatgaaagagattattatttagaacgc
cgttaccctgcttttggtaacctggttccacgtgatgtggcttctcgtgccgctaaagag
cgttgtgatgcaggttatggcgtaggtgcttctaaattggcagtatatcttgactttaaa
gcaaatacagagcgttacggtaaaatcgaagcggctaaagccggtaaccacaaccctgat
aaagaaacctgcatgcgtttaggtactgcggtaattaaggaaaaatatggtaacctgttc
gatatgtatgcgcagattactggtgagaatccttacgaaacaccaatgcgtatttatcct
gcggttcactataccatgggtggtttatgggttgattataacttaatgacatcggtacct
ggtttatactgtactggtgaggctaacttctcagatcacggtgccaaccgtttaggtgca
tcagctttgatgcaaggtttggctgatggttatttcgttctaccttacaccattggtgct
tatttatcgaaagagatttcggtaaaagcaattccgactgatcatcctgcttttgttgaa
gccgaagaaagagctgtaggtattttaaatacactgatcaatatcaaaggaaccaaatcg
gtagatcatttccataaacgtttaggccacattatgtgggagaaatgtggtatggcccgc
aacgaaaaaggtttaaaagaagcgattgaagaaatcagggctttacgtgctgaattctgg
agcgatgttcgtgtacctggaacagctgatgagttaaataccgaactagaaaaagctggc
cgtgttgccgattttatcgaactgggtgagttgatgtgtattgatgctttaaaccgtaac
gaaagttgtggtggccacttccgtgaagagtatcagacagaagaaggtgaagcactacgt
gatgatgagaactattcttacgtagccgcttgggaatttaaggaaggtgtaaacttcgaa
cttcacaaagaagaattgaagtttgaaaatattaaagtagcacaaagaagttataaatag
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