Phodopus roborovskii (desert hamster): 127213855 Help Entry 127213855         CDS       T08852                                  Symbol Ush1c Name (RefSeq) LOW QUALITY PROTEIN: harmonin   KO K21877   harmonin Organism prob  Phodopus roborovskii (desert hamster) Brite KEGG Orthology (KO) [BR:prob00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:prob03037]     127213855 (Ush1c) Cilium and associated proteins [BR:prob03037]  Primary cilia and associated proteins   USH complex and associated proteins    127213855 (Ush1c) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  USH1C_N PDZ PDZ_6 PDZ_2 Baculo_LEF5_C Motif Other DBs NCBI-GeneID:  127213855 NCBI-ProteinID:  XP_051030259 LinkDB All DBs Position Unknown AA seq 903 aa AA seqDB search MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVGDLKLVINEPNRLPLFD AIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKG GQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSNPEEPL KWQYVDQFVSESGGVRGGLGSPGNQTTKEKKVFISLVGSRGLGCSISSGPIQKPGIFISH VKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEAVNVLKSSRSLTISVVAGAGRELFMTD RERLEEARQRELQRQELLMQKRLAMESNKVLQEQQEMERQRRKEIAQKAAEENERYRKEM EEIMEEEEKFKKQWEEDWGSKEQLILPKSITAEVHPAPLRKPKSFGWFYRYDGKFPTIRK KGAEKKKAKHDSQQDLRKNKKELEFEQKLYKEKEEMLEKEKQLKINRLAQEVSETEREDI EESEKTQYWVERLCQTRLQQISSAENEITEMTTGPPPPPPSVSPLAPPLRRFAGGLHLHT TDLDDIPLDMFYYPPKTPSALPVMPHPPPINPPSKVPALPVLPSPGHVSASSSPWVQRAP PPIPILPPPSIPTQDLTPTRPLPSALEEALGNHPFRTGDPGHPAADWEPASSPTPERSFP PTPKPFCPSPQPPRGPGVSTISKPVMVHQEPNFIYRPAVKSEVLPQEMLKRMVVYQTAFR QDFRKYEEGFDPYSMFSPEQIAGKDVRLLRIKKEGSLDLALEGGVDSPVGKVVVSAVYEG GAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALHKAWNQGGDWIDLVVAVCPPKEYDD ELSSLPSAAAESPQPVRKQLGAREPVCRRGVFPQLEPADLLLKSGERGQPNPSWSPADSA PSP NT seq 2712 nt NT seq  +upstreamnt  +downstreamnt atggatcggaaggtggcccgggaattccgacacaaggtggattttctaattgaaaatgat gcagagaaggactatctttatgacgtgctgcgcatgtaccaccagaccatggatgtggct gtcctcgtgggagacctaaagctggtcatcaatgagcccaaccgtctgcccctgtttgac gccatccggcccctgatcccactgaagcaccaggtggagtatgaccagttgacaccccga cgctccaggaagctgaaggaggtgcgcctggaccgcctgcacccagaaggcctcggcctc agtgtgcgtgggggcctggaatttggctgtggactctttatctcccacctcatcaagggc ggccaggcagacagtgttgggctgcaggtaggggacgagattgtccggatcaatggctac tccatctcctcctgtacccacgaggaagtcatcaatctgatccgcaccaagaagactgtg tccatcaaagtgagacacatcggcctgatccccgtgaagagcaatcccgaggaacccctc aaatggcagtatgtggatcagtttgtgtcagagtctgggggtgtgcgaggtggcttgggc tctcctggcaatcaaacaaccaaggagaagaaggtgttcatcagtctagtaggctcccgg ggcctgggctgcagcatctccagtggccccatccagaagcctggcatcttcatcagccac gtgaagcctggctccctgtctgcagaggtggggttggagacaggagaccagattgtggaa gtcaatggcatcgacttctccaacctggaccacaaggaggccgtgaacgtcctgaagagt agccgaagcctgaccatctctgtcgtagctggagctggccgggagctgttcatgacagac cgtgaacggctggaggaagcccggcagcgggagctgcaacggcaggagctgctcatgcag aagcggctggcgatggagtccaacaaggtcctccaggagcagcaggagatggagcgccag aggagaaaggaaatcgcccagaaggctgctgaggaaaacgagagataccggaaggagatg gaggagatcatggaggaagaagagaagtttaagaagcagtgggaagaagactggggctca aaggaacagctcatcctgcctaaaagcatcaccgcagaggtgcacccggcaccccttcga aagcccaagtcctttgggtggttttaccgttacgatggcaaattcccgactatccggaag aaaggggcagagaagaagaaagccaagcatgacagccagcaggacttgagaaagaacaag aaggaactggagtttgagcaaaagctctacaaagagaaggaagagatgctggagaaggag aaacagctcaagatcaaccggctggcccaggaggtgtctgagactgagcgggaagacata gaggaatcggaaaagactcagtattgggtggagaggctctgtcagacccgcctccagcag atttcctctgccgagaatgagatcactgagatgaccacagggcccccacctcccccacct tctgtgtctcccctggccccacccttgagacgctttgccggtgggctccacctccacacc actgacctggatgacatccccctggacatgttctactatccccccaagactccctcggca ttgcctgtcatgccccaccctccacccatcaacccaccttccaaggtcccggcccttccc gtactcccctcgccaggccacgtgagcgcctcatcctcaccttgggtgcaacgcgctcca cccccgattcccattcttccccctccatccattcccacccaagacctcacgcctacccgc ccactgccctcagcactggaagaggccctgggcaaccaccccttccgcactggggaccca ggccatccagctgctgactgggagcctgccagctcccccaccccagagcggagcttccca cccaccccgaagccattttgcccaagcccacagcctccacgaggccctggagtgtccacc atctctaaacctgtcatggtccaccaggaacccaacttcatctacaggccagctgtgaaa tcggaggtcctgccgcaggagatgctgaagaggatggtggtgtatcagacagcgttcaga caagatttcagaaaatatgaagaaggctttgacccctactccatgttctcgccagagcag atcgcagggaaggatgtccggcttctgcgaatcaagaaggagggatctttagacttggcc ctggagggtggagtggactcccctgtggggaaggtggtcgtctctgctgtttatgaaggg ggagctgctgagcggcacggtggtgttgtcaaaggagatgagatcatggccatcaacggc aagattgtgacggactacacgctggcggaggcggaggccgcactgcacaaggcctggaat cagggcggggactggatagaccttgtggttgccgtttgtccccccaaggaatacgacgat gagctctcttctcttccctctgcagcagcagagagcccccagccggtgcgaaagcagctt ggagcccgtgagcccgtgtgtagacgcggggtcttcccgcagctggagcccgcggacctt cttctaaagtccggagagagaggacagcccaacccatcctggagtccagcagactctgca cctagcccctga

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