KEGG   Phodopus roborovskii (desert hamster): 127219068
Entry
127219068         CDS       T08852                                 
Symbol
Kdm6b
Name
(RefSeq) lysine-specific demethylase 6B isoform X1
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
prob  Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:prob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:prob03036]
    127219068 (Kdm6b)
Enzymes [BR:prob01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     127219068 (Kdm6b)
Chromosome and associated proteins [BR:prob03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127219068 (Kdm6b)
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL DUF3439
Other DBs
NCBI-GeneID: 127219068
NCBI-ProteinID: XP_051036221
LinkDB
Position
Unknown
AA seq 1651 aa
MHRAVDPPGARSAREAFALGGLSCAGAWSSCPPHPPPRSSWLPGGRCSASIGQPPLPAPL
PPSHGSSSGHPNKPYYAPGTPAPRPLPGKLESLHGCVQALLREPAQPGLWEQLGQLYESE
HDSEEAICCYHRALRYGGSFAELGPRIGRLQQAQLWNFHAGSCQHRAKVLPPLEQVWNLL
HLEHKRNYGAKRGGPPVKRSAEPPVVQPMPPAVLSGPSGEEGLSPGGKRRRGCSSEQAGL
PPGLPLPPPPLPPPPPPPPPPPPPPPPLPGLAISPPFQLTKPGLWNTLHGDAWGPERKGS
APPERQEQRPSLSHPYPYPAPAYTAHPPSHRLLPATPLGPGPRPPGAESHGCLPATRPPG
SDLRESRVQRSRMDSSVSPAASTACVPYAPSRPPGLLGTSSSSSSSSNNTGLRGVEPSPG
IPGADHYQTPALEISSHQARLGPSAHSSRKPFLTAPAATPHLPVPPGTPSSPPAPCPRLS
RPPPPPAWMKGPACRSTREDGEILGELFFGAEGPPRPPPPLPHRGDGFLGPPTPRFSVGT
QDSHTPATPPTTAAAATSSSSSSSNNHSSSPTGPVAFPPPPYLARSVDPLPRPSSPTLSS
QDPPLPPLTLALPPAPPSSCHQNTSGSFRRSESPRPRVSFPKTPEVGQGPPPGSLSKAPQ
PVPPGVGELPARGPRLFDFPPTPLEDQFEEPAEFKILPDGLANIMKMLDESIRKEEEQQQ
QEAGVVPPPPLKEPFASLQPPFPSDTAPTTTTTAATTTTTAAATTTTTTTTTQEEEKKPP
PTLPPPPPLAKFPPPPQSQPPPPPPASPASLLKSLASVLEGQKYCYRGTGAAVSTRPGSL
PTTQYSPSPASGATAPPPTSTAPSAQGSPKPSVSSSSQFSTSGGPWARERRAGEEPAPGP
VTPAQLPPPLPLPPARSESEVLEEISRACETLVERVGRSAASPTDPVAIADPVDSGTDPL
LPPAQTKEESGGVTVAGAGAGSGKRRQKEHRRHRRACRDSVGRRPREGRAKAKAKAPKEK
SRRVLGNLDLQSEEIQGREKARSDVGGASKVKTPTAPTPPPAPAPSAQPTPPSAPVPGKK
TREEAPGPPGVSRADMLKLRSLSEGPPKELKIRLIKVESGDKETFIASEVEERRLRMADL
TISHCAADVMRASKNAKVKGKFRESYLSPAQSVKPKINTEEKLPREKLNPPTPSIYLESK
RDAFSPVLLQFCTDPRNPITVIRGLAGSLRLNLGLFSTKTLVEASGEHAVEVRTQVQQPS
DENWDLTGTRQIWPCESSRSHTTIAKYAQYQASSFQESLQEEKESEDEESEEPDSTTGTP
PSSSAPDPKNHHIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRVTSTGNMLSHVGHTILG
MNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDY
LTGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQ
YQLALERYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLFKMIKFCLLQSMKHCQVQRE
SLVRAGKKIAYQGRVKDEPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRRSAG
LQGVVVLEQYRTEELAQAYDAFTLAPASTSR
NT seq 4956 nt   +upstreamnt  +downstreamnt
atgcatcgggcagtggaccctccaggggcccgctctgcacgggaagcctttgcccttggg
ggcttgagctgtgctggggcttggagctcctgcccaccccatcctcctcctcgaagctca
tggctgcctggaggcagatgctctgccagcattgggcagcccccactccctgctccttta
ccaccttcacacggcagtagctctgggcacccaaacaaaccctattatgcacctgggaca
cctgccccgagacccctccccgggaagttggaatccctgcatggctgtgtgcaggcactg
ctccgggagccagcccagccggggttatgggaacagcttgggcaattgtatgagtcggag
catgacagcgaggaggccatatgctgctaccacagggctcttcgatatggaggaagcttc
gctgagctggggccacgaattggccgattgcagcaggcccagctctggaattttcatgct
ggttcctgtcagcatcgagccaaggtcctgcccccgctggagcaagtatggaatttgctg
caccttgagcacaaacggaactatggggctaagcgagggggtcctccagtgaagcgatct
gctgaacccccagtggtacagcctatgcccccagcagtactctcaggcccctcaggagag
gagggcctcagccctggaggaaagcgcaggagaggctgcagctctgaacaggctggcctt
cccccaggtctgccactgcctccaccaccattaccgccgccgccgccgccacccccacct
ccacccccacccccaccaccgctgcctggcctggctattagccctccatttcagctgact
aagccagggctgtggaataccctgcatggagatgcttggggcccagagcgcaagggttca
gcacccccagagcgccaggagcagcggccttcgctgtctcacccatacccatacccagct
cctgcctacactgctcatccacccagccaccgcttgcttccagccacaccccttggtcca
ggtccccgacccccaggagcagagagccatggctgcctgcctgccacccgtccccccgga
agtgaccttagagagagcagagttcagaggtcgcggatggactccagcgtttcaccagca
gcatctaccgcctgcgtgccttacgccccttcccggccccctggcctcctcggcaccagc
agcagcagcagcagcagcagtaacaacactggtcttcggggtgtggagccgagcccaggc
attcctggcgctgaccattaccaaactcctgcgctggagatttcctctcaccaggcccgc
ctggggccttcggctcacagcagtcggaaaccatttttgacagcccccgctgccacaccc
cacttacctgtaccacctgggaccccatcatccccgccagccccctgtcctcgcctctca
cgccctccaccgccccctgcttggatgaagggcccagcctgccgctcgacccgagaggat
ggagagatcttaggggagctcttctttggtgctgagggaccaccccgtcctcccccgccc
cttccccaccgtggtgatggcttcttggggcctccaactccccgcttttctgtgggcact
caggattcgcatacccctgccactccccccaccaccgccgccgccgccaccagcagcagc
agcagcagcagcaacaaccacagcagtagtcctactgggcccgtggccttccctccaccc
ccctatctggccagaagtgtagacccccttcccaggccatctagcccaaccctgagctcg
caggacccacctcttccaccactgactcttgccctgcctccagcccctccctcctcctgc
caccaaaatacctcaggaagcttcaggcgctcggagagcccccggcccagggtctccttc
ccaaagacccccgaggtggggcaggggccacccccaggctctctgagtaaagccccccag
cctgtgccacctggggttggagagctgcctgcccgaggcccgaggctctttgattttcca
ccaactccactggaggaccagtttgaagagcccgctgaattcaagatcctacctgatggg
ctagctaacatcatgaagatgctggatgaatccattcgcaaggaggaggaacagcagcaa
caggaggcaggcgtggttcccccgcccccactcaaagagccctttgcatctctacagcca
ccctttcccagtgacacagccccaaccaccaccaccactgccgccaccaccaccaccacc
gccgccgccaccaccaccaccaccaccaccaccacccaagaagaggagaagaagccacca
ccaaccctaccaccgcctccgcctctagccaagtttcctccacccccccagtcgcagccc
ccaccacctccaccagccagcccagccagcctgctcaaatcattggcctctgttctcgag
ggacaaaagtactgttaccgggggactggagcagctgtttcaaccaggcccgggtccttg
cccaccactcagtattcccctagtcctgcatcaggtgctaccgccccaccacccacttca
acggcccctagcgcccagggctcccccaagccctctgtttcctcgtcatctcagttctct
acctcaggcgggccttgggcccgggagcgcagggcgggtgaagagccagcaccaggcccc
gtgacccctgcccagctgcccccacctctgccgctgccccctgctcgttctgagtctgag
gtgctagaagagatcagtcgggcttgcgagacccttgtggagcgggtgggccggagtgct
gccagcccaacagacccagtggccatagcagacccagtggacagtgggacggacccgctc
ctgcctcctgcacagactaaggaggagagtggtggggtgacagtggcaggagccggcgca
ggtagtggcaaacgtcggcagaaggagcatcggcggcacagacgggcctgtagggacagt
gtgggtcgtcggccccgtgaggggagggccaaggccaaggccaaggctcccaaagaaaag
agccgaagggtgctagggaacctggacttgcagagtgaagaaatccagggccgggagaaa
gcccggtctgatgtaggcggggcttccaaagtcaagacccccaccgctccaacgcccccg
cctgctcctgcaccctctgctcagcctacacccccatctgcccccgtgcctgggaagaag
acccgagaggaagctccagggcccccaggtgtgagccgagcagacatgctgaagctccgg
tcccttagtgaggggcctcccaaggagctgaagatcaggctcatcaaggtagagagcggt
gacaaggaaaccttcattgcttctgaggtggaagagcggcggcttcgcatggcagacctc
accatcagccactgtgctgctgatgtcatgcgtgccagcaagaatgccaaggtgaaaggg
aaatttagagagtcctacctttctcctgcccagtctgtgaaaccgaagatcaacactgag
gagaagctgccccgggaaaaactgaacccccctactcccagcatctatttggagagcaaa
cgggatgccttctcaccagtcctgctgcagttctgtacagaccctcggaaccccatcacc
gtgatcaggggcctggctggctcacttaggctcaacttaggccttttctccaccaagaca
ctggtggaggcaagcggggagcacgcagtggaggtgcgcacccaagtacagcagccctca
gacgagaactgggacctgacagggacaaggcagatctggccctgtgagagctcccgttca
cacaccaccatcgccaagtacgcgcagtaccaggcatcgtccttccaggagtcactgcag
gaagagaaggaaagtgaggatgaggagtcagaggaaccagatagcactacaggaacccct
cccagcagcagtgcaccggaccccaagaaccatcatatcatcaagtttggcactaatatc
gacctgtctgatgccaagaggtggaagccccagctacaagagctgctgaagctgcctgcc
ttcatgcgggtaacatccacaggcaacatgctcagccatgtgggccacaccatcctgggc
atgaacaccgtgcagctatacatgaaggtccctggcagccgaacgccaggccaccaagag
aataacaacttctgctctgtcaatatcaacattggccccggggactgcgagtggtttgca
gtacatgagcactactgggagaccatcagcgccttctgcgatcggcatggtgtggactac
ttgactggttcctggtggccaatcttggatgacctctatgcgtccaatattcctgtttac
cgcttcgtgcagcgccctggagaccttgtgtggattaacgcagggactgtgcattgggtg
caggctactggctggtgcaacaacatcgcctggaacgtggggcccctcaccgcctatcag
taccagctggcgctagagcgatacgaatggaacgaggtgaagaacgtcaaatccattgtg
cccatgattcatgtgtcctggaacgtagctcgcacggtcaaaatcagcgatcctgacttg
ttcaagatgatcaagttctgcctcctgcagtcaatgaagcattgccaggtgcagcgggag
agcctggtgcgggcagggaagaaaatcgcttaccaaggccgcgtcaaggatgagcctgcc
tactactgcaacgaatgcgatgtggaggtgttcaacatcctgttcgttacgagtgagaat
ggcagccgaaacacgtacctggtgcactgcgagggctgtgcgcgccgtcgcagcgcgggc
ctgcagggcgtggtggtgctagagcagtaccgcacggaggagctggcgcaggcctacgat
gccttcacgctggctcccgccagcacgtcgcgatga

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