Phodopus roborovskii (desert hamster): 127236973
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Entry
127236973 CDS
T08852
Symbol
Ubc
Name
(RefSeq) polyubiquitin-C isoform X1
KO
K08770
ubiquitin C
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03320
PPAR signaling pathway
prob04120
Ubiquitin mediated proteolysis
prob04137
Mitophagy - animal
prob04140
Autophagy - animal
prob05012
Parkinson disease
prob05022
Pathways of neurodegeneration - multiple diseases
prob05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127236973 (Ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127236973 (Ubc)
04137 Mitophagy - animal
127236973 (Ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
127236973 (Ubc)
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
127236973 (Ubc)
09164 Neurodegenerative disease
05012 Parkinson disease
127236973 (Ubc)
05022 Pathways of neurodegeneration - multiple diseases
127236973 (Ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127236973 (Ubc)
Ubiquitin system [BR:
prob04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
127236973 (Ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
127236973
NCBI-ProteinID:
XP_051060935
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSNTTKKVKQEDGRTFLTTVSRKSTPCACSWA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccagt
gacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaagagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatcttt
gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcgag
aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaagag
tccaccctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctg
acaggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaatgtcaaggca
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctgtccgactacaacatccagaaagagtccaccctgcac
ctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgacaggcaagacc
atcaccctggaggtcgagcccagtgacaccatcgagaatgtcaaggcaaagatccaggac
aaggagggcatcccccctgaccagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctgtctgactacaacatccagaaagagtccaccctgcacctggtcctccgc
ctcaggggtgggatgcagatctttgtgaagaccctgacaggcaagaccatcaccttggag
gtcgagcccagtgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatc
ccccctgaccagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctg
tccgactacaacatccagaaagagtccaccctgcacctggtcctccgcctcaggggtggg
atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt
gacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaagagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatcttt
gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcgag
aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaagag
tccaccctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctg
acaggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaatgtcaaggca
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctgtccgactacaacatccagaaagagtccaccctgcac
ctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgacaggcaagacc
atcaccctggaggttgagcccagtaacaccaccaagaaagtcaaacaggaagatggacgc
acctttctcactacagtgtctagaaagagcacaccttgtgcttgttcttgggcttga
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