Pedobacter roseus: H9L23_03595
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Entry
H9L23_03595 CDS
T06980
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
proe
Pedobacter roseus
Pathway
proe00550
Peptidoglycan biosynthesis
proe01100
Metabolic pathways
proe01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H9L23_03595 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9L23_03595 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
proe01011
]
H9L23_03595 (mrdA)
Enzymes [BR:
proe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
H9L23_03595 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
proe01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
H9L23_03595 (mrdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QNN43198
UniProt:
A0A7G9QIM3
LinkDB
All DBs
Position
complement(810160..812169)
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AA seq
669 aa
AA seq
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MDQLFNRKYIVQGLFIVIALILLGKLFYIQIISDKAFSSAESNVLRKIYKYPARGAILDR
NMKVIVQNEPVYDLMVTPNEVKPFDTLGLANALEITVEDVRKKLKKARAQSSYQSTFFER
QISVQSYARLQEIMYRFPGFRTQDRTIRHYPDSVAGQLFGYVKEVSPDDIEKSEGYYKPG
DFIGKSGLERSYEDFLRGEKGVINTLYDAKNIAQGSYANGKYDVNAVSGDRLISSIDIRI
QRLGEELMKNKVGAIVAIEPSTGEILAFVSSPGYDPNQFVGKDWGKNYMSLIANPYRPQI
VRPIAGQYSPGSSFKPVDALVALQDGAIDPNTTFFCPGYYMAGNHKVKCEHVDGTINMQR
GIARSCNTYFCHVFQSIITKNGMKNQRQTYANWHEQISKWGFGQKLGIDMPFEKKGIFYQ
GDHYDKIYGKRWGYTTVISQAIGQGEITSTPLQMANVMAAIANRGYYLKPHLIKGIGDKN
VVKKEYVVKNYVGVDEKYFPIVIDGMRDAVNSPWGTAKESQIPNILMCGKTGTVQNPHGK
NHSVFIGFAPMDNPKIAIAVIVENGGFGGSYAAPISSFMVEKYLTDTIKPRSNGYTVKAF
SETNLLPALIDKTKKVKLTKLDSLNLKKADSLKRVKDSLKIKPAILKQTVATKPKVNQPI
VNQKPVTNK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttatttaaccgaaaatatatcgttcaaggattatttattgtaatcgccctg
attttgctggggaagttattttatatccagatcattagcgataaggccttcagttctgct
gaaagtaacgtgttgcgtaaaatttataaataccctgcccgtggtgccatcctcgaccgg
aacatgaaagtaattgtgcagaacgaacccgtgtacgatttaatggttaccccaaacgaa
gttaaacccttcgatacccttggactggccaatgctttagaaattacagttgaggatgtg
cgtaaaaaactgaaaaaagcaagggcacaatcttcttatcagtctacatttttcgaaagg
cagatttctgtacagagttacgcccgtttacaggaaattatgtaccgttttccgggtttc
aggacgcaggacagaacgatcaggcattatcctgatagcgttgccggacaactttttggt
tatgttaaagaagtgagtccggatgatattgaaaaatcggaaggttattataaaccgggc
gattttatcggaaaaagtggccttgaacgttcttatgaagattttttaaggggcgaaaaa
ggggtgatcaatactttgtacgatgctaaaaatattgcccaggggagttatgccaatggg
aaatatgatgtaaatgccgtatcgggagatcgtttaatttcttctatagacatcaggatt
caacgtcttggcgaagaattgatgaaaaataaagttggtgccattgttgccatcgaacct
tcaaccggagagatcctggcttttgtaagtagcccgggatatgatcccaaccaatttgtg
ggtaaagattggggcaaaaactacatgagtttgattgctaatccttaccgtccgcagatt
gtaaggcctattgcaggacaatattctcccggatcatcgtttaaacctgtagatgctttg
gtagcattgcaggatggcgcaattgatccaaatactacgtttttctgtccgggctattac
atggccggaaaccataaagtaaaatgcgagcacgttgatggtaccatcaacatgcaacgc
ggtattgcccgttcttgcaacacctatttctgccatgtttttcagagcatcattaccaaa
aacggcatgaaaaatcaacgccaaacctatgccaactggcatgagcagatttctaaatgg
ggttttggtcagaaattgggaatcgatatgcctttcgaaaaaaaggggatattttatcag
ggagaccattatgataaaatttatggcaaacgctggggatacaccactgtaatttcgcag
gccattggtcagggagaaattacctctaccccgttgcaaatggcaaacgttatggcggca
attgccaaccggggctattatttaaagcctcacttaattaaaggtatcggtgataaaaat
gttgttaaaaaagaatatgtagttaaaaactatgtaggtgtagatgagaaatatttcccg
atcgtaattgacgggatgcgcgatgcggtaaacagtccgtggggaacagcaaaagaatct
cagatacccaatattttgatgtgtggcaaaaccggaacggtacaaaacccacatggcaaa
aaccactcggtttttatcggttttgcaccaatggataaccctaaaattgccattgcagta
atagtagaaaatggtggttttggaggttcgtatgcagcaccgatatcgagtttcatggta
gaaaaatacctaacggataccattaagccacgttcgaatggctataccgtaaaagcattc
tccgaaaccaatcttttacctgctttaatcgacaaaacaaaaaaggttaaattaaccaaa
ctggatagtttaaatcttaaaaaagccgattcacttaaaagggttaaagacagcttaaaa
ataaaaccggcaatattaaaacaaactgttgctaccaaaccgaaagtaaatcaacccatt
gtaaaccaaaaacctgtaaccaataaatag
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