Proteiniphilum propionicum: KDN43_04675
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Entry
KDN43_04675 CDS
T08430
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
proj
Proteiniphilum propionicum
Pathway
proj03410
Base excision repair
proj03430
Mismatch repair
proj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDN43_04675 (recJ)
03430 Mismatch repair
KDN43_04675 (recJ)
03440 Homologous recombination
KDN43_04675 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
proj03400
]
KDN43_04675 (recJ)
DNA repair and recombination proteins [BR:
proj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KDN43_04675 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KDN43_04675 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KDN43_04675 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ULB35337
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Position
1209407..1211122
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AA seq
571 aa
AA seq
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MTYRWNYSTLSNDQKNKKNELAEELNLHPVLVELLFNRGIETKEEANRFLYPKLEDLHDP
FLLPDMDKAILRIERAIGNKERILVYGDYDVDGTTAVSLVYKFFRGITSNIDYYIPDRYD
EGYGISFQGIDYALNTGVKLIISLDCGIKAVSKIAYAKEKGIDFIVCDHHMPDDQLPDAV
AVVDAKRLDSVYPYDDLSGCGVGFKLVQAFSQRNGYPFSDIEPLLDLVAVSIASDIVPLT
GENRVMFHYGLKQLNSNPSFGLRGIIEICGLHRKHITVNDIVFKIGPRINASGRMMNGKE
AVDLMLANDMTAAREKSKNIDKYNEDRRELDKKITDEAIEYIENYIDISSHKSFVIYNET
WHKGIVGIVASRLTEKYYRPAVVLTKSNGLISGSARSVPGFDVYKTIESCRDILENFGGH
TYAAGLTLREENLEEFTTRFNTLSFDGIEPRMMLPQITVDAEITLSEITSCFVEGLSLFN
PFGPENENPVFLTRNVFDSGNSKLVGKGYRHIKLEVIDETTENPMPGIAFCQHEYYKRIK
EGLPIDICYTIEENTHGNKTFTQLMVKDIRG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacttacagatggaattactcaaccctgtcaaacgaccaaaaaaataaaaaaaatgag
ttagctgaagaattaaatttacatcccgtacttgttgaattgctttttaacagaggaata
gaaacgaaagaagaggcaaacaggtttctatatcctaagcttgaagatttgcacgatcct
tttcttcttcctgatatggataaagcaatcttgagaattgaaagggctattggcaacaag
gagcgaattcttgtttacggggattacgatgtggatggcacaacggcagtttcgttggtg
tacaaattctttcgcgggataacaagtaatattgattattatattcccgaccggtacgat
gaagggtatggcatttcgtttcagggaatcgattatgctctaaacacgggtgtaaagctc
ataatctctctcgattgcggcatcaaagcggtaagtaagatcgcttatgctaaagaaaaa
ggtattgactttattgtttgtgatcatcatatgcctgatgatcagctccctgatgctgtt
gctgttgtagatgcaaaaaggttagactcggtttatccatatgatgatctttcagggtgt
ggtgtaggttttaagcttgtacaggcattttcgcaacgaaacggttatcctttctctgat
attgagccattgctcgacttggtggcagtgagcattgcatccgatattgtgccgttaacc
ggtgaaaacagggtgatgtttcattatggccttaagcagcttaactccaatcccagcttt
gggctacgtggtattatcgagatatgcgggctgcacaggaaacatattacggtaaacgat
attgtttttaaaattgggcctcgcatcaatgcatcaggaaggatgatgaacgggaaggaa
gcggttgacctgatgctggcaaacgatatgactgcagccagggagaaaagcaagaatatt
gataaatataatgaagatcgtcgtgagcttgataagaagatcactgatgaggctattgaa
tatatagagaactacatcgatataagtagccataagagttttgtgatttataacgaaacg
tggcacaaaggcattgtgggaattgtggcttctaggcttaccgaaaaatattaccgtcct
gcagtggtcctcacaaaatcaaacgggttgatttccggttcagccaggtcggtaccaggt
tttgatgtatataaaaccatagagtcgtgccgtgatatacttgagaattttggtggtcac
acctatgctgccggattgactctgcgagaagagaacctggaagagtttaccacgcgtttc
aatacgctatctttcgacggcattgagccaaggatgatgctgcctcagattactgtagat
gctgagataacattgtcggagattacctcttgttttgttgagggcctctctctttttaac
ccgtttggccctgagaatgagaatcctgtgtttttgaccaggaacgttttcgattccgga
aacagtaagcttgttggcaagggataccgccatattaagcttgaggttattgatgaaaca
accgaaaatcccatgcctggcatcgctttttgtcaacatgaatattacaagcgtataaaa
gagggcctgccaatagatatctgttatacaatagaagagaatacgcatgggaacaaaacg
ttcacacagttgatggttaaggatattaggggataa
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