Propionimicrobium sp. PCR01-08-3: QQ658_02050
Help
Entry
QQ658_02050 CDS
T09133
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
prop
Propionimicrobium sp. PCR01-08-3
Pathway
prop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QQ658_02050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prop03021
]
QQ658_02050
03400 DNA repair and recombination proteins [BR:
prop03400
]
QQ658_02050
Enzymes [BR:
prop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QQ658_02050
Transcription machinery [BR:
prop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QQ658_02050
DNA repair and recombination proteins [BR:
prop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QQ658_02050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WIY83164
LinkDB
All DBs
Position
427790..431278
Genome browser
AA seq
1162 aa
AA seq
DB search
MATSRNASKNTNVISTSGRISFAKIAEPLQVPNLLDLQIDSFNWLIGSEAWQQKTEQALE
QGRTDVNTRSGLEEIFDEISPIEDFNQTMSLSFRDHRFEEPKHSIDECKDRDTTYAAPLF
VTAEFMNNETGEIKSQTVFIGDFPLMTDKGTFIVSGTERVVVSQLVRSPGVYFEQTPDKT
SDKDIFTCKVIPSRGAWLEFEIDKRDQVGVRLDRKRKQNVTVLLKALGWSEDRILEQFGQ
YESIRMTLEKDHVTTQDEALLDIYRKLRPGEPPARDAAEQLLTNYYFNPKRYDLAKVGRY
KINQKLGLNLPFDTQVLTIDDIVAAIDYICALHEGKTEIEREGGQTVLVEADDIDHFGNR
RLRTVGELIQNQLRTGLGRMERVVRDRMTTQDIEAITPSTLINIRPVTAALKEFFGTSQL
SQFMDQNNPLAELTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPEGPNIGL
IGSLASFARVNAFGFIETPYRKVVDGRVTDEIDYLTAHEEDRYNIAQANAELDENGRFVE
DHVVVRVRHGDADAVPASEVGYIDVSPRQMVSVATALIPFLEHDDASRALMGANMQRQAV
PLIRSEAPYVGTGMEYRAAVDVGDVTLAHRPGVVTSVSGDLIEVANDDGSYETFRLEKFR
RSNAGTCVNQRPMVHAGDRVEAGTPLADGPCTDNAELALGRNLLVAFMPWEGLNYEDAII
LSQRIVSDDVLTSIHIEEHEVDARDTKLGPEEITRDIPNVSDDMLANLDERGIIRIGAEV
TTGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGEDGTVIGVRVFDRE
EDDELPPGVNQMVRVYVAQKRKVQVGDKLAGRHGNKGVISKILPLEDMPFLPDGTPVDII
LNPLGVPSRMNVGQVLETHLGWIAHSGWDITEVDEDWAERLRDVGLGQVSGDQRLATPVF
DGAGEDEIGGLLTNGLPNRDGVRMVNGDGKATLFDGRSGEPFPEKVGLGYMYMLKLHHLV
DDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAWALQEMLTIKSDDVP
GRVKVYEAIVKGENIPEPGIPESFKVLVKEMKSLCLNVEVLSSDGEVVDLRDSEDDYRTQ
EDLGIDLSRRPGADSFAIVDEV
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttggccacctcgcgcaatgcgtcgaagaacaccaacgtcatctccaccagcggccgtatc
tcgtttgccaagatcgccgagccgctgcaggtgcctaatctactcgacctgcagattgat
tcgttcaactggctgatcggcagtgaggcctggcagcaaaagacggagcaggccctggag
cagggcaggactgacgtcaacaccaggtcgggcctggaggagatcttcgacgagatcagc
cctattgaggacttcaatcagacgatgtcgctgagtttccgcgaccatcgtttcgaggag
cccaagcactcgatcgacgaatgcaaggatcgcgacaccacgtacgcggccccgctgttc
gtgaccgccgagttcatgaacaatgagaccggcgagatcaagagccagaccgtgttcatc
ggcgatttcccgttgatgaccgacaagggcacgttcatcgtcagcggcaccgagcgcgtg
gtggtgagccagctcgtccgctctcccggtgtgtacttcgagcagacccccgacaagacc
tccgacaaggacatcttcacctgcaaggtgatcccgtcgcgtggtgcctggctggagttc
gagatcgacaagcgcgaccaggtcggcgtccggttggaccgtaagcgcaagcagaacgtc
accgtgctgctgaaggcgctcggctggagcgaggatcgcatcctcgagcagttcggccag
tacgagtcgatccggatgaccctcgagaaggatcacgtcaccactcaggacgaggccctg
ctcgacatctaccgcaagctgcgcccgggcgagccgccggcccgcgatgcggccgagcag
ttgctcaccaactactacttcaacccgaagcgctacgacctggccaaggtcggacgttac
aagatcaaccagaagctgggcctgaacctgccgttcgacacccaggtgctgacgatcgac
gacatcgtcgctgcgatcgactacatctgcgcgctgcatgagggcaagaccgagatcgag
cgtgagggcggccagaccgttctggtcgaggccgatgacatcgaccacttcggcaaccgc
cggctgcgtaccgtgggcgagctgatccaaaaccagctgcgcaccggtctgggacgcatg
gagcgggtcgtccgcgaccggatgaccacccaggacatcgaggcgatcaccccgtcgacc
ctgatcaacattcgtccggtgaccgcggcgctgaaggagttcttcggcacctcgcagctg
tcccagttcatggaccagaacaacccgctggccgagctgacgcacaagcgtcgtctgtcg
gcgctgggccccggcggcctgagccgtgaccgggcaggcatggaagtccgagacgtgcac
ccctcgcactacggacgcatgtgcccgatcgagacccctgaaggcccgaacatcggcctg
atcggatcgctggcctcgttcgcccgggtgaacgccttcgggttcatcgaaaccccgtac
cgcaaggtcgtcgacggccgcgtcaccgacgagatcgactatctgaccgcgcacgaagaa
gaccggtacaacatcgcgcaggccaatgcggagctggacgagaacggccgcttcgtcgaa
gaccacgtcgtggtgcgtgtgcgccacggcgatgcggacgccgtccccgcgagcgaagtc
ggttacatcgacgtctcgccgcgccaaatggtgtcggtcgccaccgcgctgatcccgttc
ctcgagcacgacgatgcgtcgcgtgccttgatgggcgcgaacatgcagcgccaagccgtg
ccgctgatccgcagcgaggctccctacgtcggtaccggcatggaataccgcgccgctgtc
gacgtcggcgatgtcacgctggctcatcgtccgggtgtggtcaccagcgtttccggagac
ctgatcgaggtcgccaacgacgatggctcctacgagaccttccggctggagaagttccgc
cgctcgaacgcgggcacctgcgtcaaccagcgtccgatggtgcatgcgggcgaccgtgtc
gaggccggcaccccgctggccgacggcccctgcaccgacaacgccgagttggcgctcgga
cgcaacctgctggtcgcgttcatgccctgggagggcctcaactacgaggacgcgatcatt
ctcagccagcgcatcgtgagtgacgacgtgctcacctcgatccacatcgaggagcacgag
gtcgatgcccgcgacaccaagctcggccccgaagagatcacccgcgacatcccgaacgtc
tccgacgacatgctcgccaacctcgacgagcgcggcatcatccgcatcggagccgaggtc
accaccggcgacatcctggtcggcaaggtcaccccgaagggcgagaccgagctgactccc
gaggagcgcctgctgcgcgccatcttcggcgagaaggcccgcgaggtgcgcgacacctcg
atgaaggtgccgcacggcgaagacggaaccgtcatcggtgtgcgcgtcttcgaccgcgaa
gaggacgatgagctgcccccgggcgtgaaccagatggtgcgcgtctacgttgcccagaag
cgcaaggtgcaggtgggcgacaagctcgccggccggcacggcaacaagggtgtcatctcg
aagatcctgccgctggaagacatgccgttcctgcccgatggcactccggtcgacatcatc
ttgaacccgctgggtgtgccgtcgcgaatgaacgtgggtcaggtgctggaaactcacctc
ggctggatcgcccactccggttgggacatcaccgaggtggacgaggactgggccgaacgg
ctgcgcgatgtcggcctgggccaggtgtccggcgaccagcggctggccactccggtgttc
gacggcgcaggcgaggacgagatcggtggtctgctgaccaacggtctgcctaaccgcgac
ggtgttcggatggtgaacggtgacggcaaggccaccttgttcgacggacgctccggcgag
cctttcccggagaaggtcggtctgggttacatgtacatgctgaagctgcaccacctggtc
gacgacaagatccacgcgcgctcgaccggtccgtactcgatgatcacccagcagccgctg
ggtggtaaggcacagttcggtggccagcgtttcggtgagatggaggtgtgggctctggag
gcgtacggcgccgcctgggcgctgcaagagatgctcaccatcaagtccgatgacgtgccc
ggccgcgtcaaggtctacgaggcaatcgtcaagggggagaacatccccgagcccggcatc
cccgagtcgttcaaggtgctcgtcaaggaaatgaagtccttgtgcctgaacgtcgaggtg
ctgagcagcgacggtgaggttgtcgatctgcgcgacagcgaggacgactatcgcactcag
gaagacttgggaatcgacctgtcgaggcgtccgggtgctgactcgttcgccatcgtggac
gaagtctga
DBGET
integrated database retrieval system
