Paenibacillus sp. RUD330: CIC07_06930
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Entry
CIC07_06930 CDS
T11330
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
prud Paenibacillus sp. RUD330
Pathway
prud03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIC07_06930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prud03400
]
CIC07_06930
Enzymes [BR:
prud01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CIC07_06930
DNA repair and recombination proteins [BR:
prud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIC07_06930
Prokaryotic type
CIC07_06930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASS65906
LinkDB
All DBs
Position
complement(3336911..3337696)
Genome browser
AA seq
261 aa
AA seq
DB search
MAGYFSNDWDGLLQEEMSLPYYKKLRSKLAEEYRSETVYPDPHDIFNSLHYTSLEEVKVV
ILGQDPYHGPGQAHGLSFSVQPGVRIPPSLKNIYKELHEDVGCPVPESGDLRGWAGQGVL
LLNNVLTVRRGQAASHQGLGWERFTDRIVRLIGERERPAVFMLWGRHAQEKASFLDGSRH
LLIASPHPSPFSAHRGFLGSRPFSRANEFLLQNGMTPIDWCRTASLDADDPSDGRAAAAL
GASGSERKAEASGRGRAQDGR
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggccggatatttcagcaacgattgggacggactgctgcaggaggagatgtctcttccc
tattataagaagcttcgcagcaagctggcggaagaataccgctcggaaaccgtgtacccg
gacccgcacgatattttcaactcgcttcattatacttccctggaggaggtcaaggtggtc
attcttggccaggatccctatcatggtcccggacaggctcacggcctcagcttctcggtc
cagccgggagtccgcattccgccttccttgaaaaacatctacaaggagctgcacgaggat
gtcggctgtcccgtgccggaatccggcgatcttcggggctgggcgggccagggagtgctg
ctgctgaacaacgtattgaccgtccggcgcggacaagccgcatcgcatcaggggctcgga
tgggaaaggttcaccgaccgcatcgtccgcctgatcggagagagggagcgtccggccgtc
ttcatgctgtggggcaggcacgcccaggagaaagcttccttcctggacggaagccgtcat
ctgctgatcgcttccccgcatccgagcccgttttcggcgcacagggggttcctgggcagc
cggcctttctcgagggcgaacgaattcctgcttcaaaacggcatgacgccgatcgactgg
tgccggacagcttccctggatgctgacgatcccagcgacgggagggctgcggcagcgctt
ggcgcctccggctcggagcgcaaggcagaggcttcagggcgagggagagcgcaggatggc
cgttaa
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integrated database retrieval system
