Pyrgilauda ruficollis (rufous-necked snowfinch): 121350520
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Entry
121350520 CDS
T07608
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03013
Nucleocytoplasmic transport
pruf04141
Protein processing in endoplasmic reticulum
pruf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121350520 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121350520 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121350520 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121350520 (SEC13)
04131 Membrane trafficking [BR:
pruf04131
]
121350520 (SEC13)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121350520 (SEC13)
Membrane trafficking [BR:
pruf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121350520 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121350520 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
121350520 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
121350520
NCBI-ProteinID:
XP_041317842
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MAEGSAGRGLAARSVPCRAAPRRREEPGRRALGAGKGLCPGPGGGSGRSAGPARGRTGQS
PLPPLALSLPSRGSGRPGTRHGRNVVAGGRGAAGPVVRGTGVPRRSARAEAGRSGAGGVP
VRGPSAAGGGLPPRPGQPGARHRVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVK
IFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYE
YTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSW
APAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVKIWKEEEGQWKEEQKLEAHSDWVRDVA
WAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAV
SGGDNKVTLWKESVDGLWACISDVNKGQGGVSAVTEGQQNEQ
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggctctgcggggcgcgggctcgccgcccgctccgttccgtgccgggcggcc
ccaaggcggcgggaggagccgggccggagggctttgggcgccggtaaagggctctgtccg
ggccccggcggtggctcggggcgctcggcgggcccggctcgcggcaggacaggtcagtcg
ccgctcccgcccctcgccctctccctgcccagccgaggcagcggccgccccggaacccgg
cacgggcggaacgtcgtcgcaggcgggcggggcgcggcggggccggttgtgcgcgggacc
ggcgtgccacgtcggagcgcgcgggcagaggccgggcggagcggggccggcggcgtcccg
gtgcggggcccgagcgcagccgggggcggcctcccgccgcggcccgggcagcccggggca
cggcacagggtgtcggtcattaacaccgtggacacgtcccacgaggacatgatccacgac
gcgcagatggattactacggcacgcgcctggccacctgctcctccgaccgctccgtcaag
atcttcgacgtgcgcaacggggggcagatcctcatcgcagacctcagggggcacgaaggt
cctgtgtggcaggttgcctgggctcatcctatgtatgggaatatcttggcttcctgttcc
tatgacaggaaggttattatctggaaggaagaaaatggcacttgggaaaagacctacgag
tacacgggacatgattcttcagtgaattctgtctgctgggcaccacacgactatggactg
atcctggcctgcgggagctctgacggggccatttccctgttgagctacacgggtgatggg
cagtgggaagtcaaaaagatcagcaatgcacacacgattggatgtaatgcagttagctgg
gctcctgctgttgtaccaggaagccttatagaacaaccctctggtcaaaagccaaactac
atcaaaagatttgcatctggtggctgtgacaacctggtcaagatctggaaggaagaagag
ggtcagtggaaagaagagcagaagctggaggctcacagtgactgggtacgagacgtggcc
tgggccccatccatcgggttgccgaccagcaccattgctagctgctctcaggatggccga
gtgtttatctggacgtgtgatgatgcctctggaaactcctggtcgccaaagctgctgcac
aagttcaatgatgttgtctggcacgtgagctggtccatcactgccaacatccttgcagtg
tctggaggagacaacaaagtgacactgtggaaggagtcggtggacggactgtgggcgtgt
atcagcgacgtgaacaagggccaaggaggggtgtctgctgtgacagaagggcagcagaat
gagcagtga
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