Pyrgilauda ruficollis (rufous-necked snowfinch): 121352320
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Entry
121352320 CDS
T07608
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121352320 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121352320 (NUP160)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121352320 (NUP160)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121352320 (NUP160)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121352320 (NUP160)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
121352320
NCBI-ProteinID:
XP_041321081
LinkDB
All DBs
Position
Unknown
AA seq
1394 aa
AA seq
DB search
MAAALAARSCLELSAAGRAPPRSPQELIFVPPGVAPLPAGRYSDSAGGFCYQESAQLGAA
TRNRWVRWSTSGDTVELVEESLDVNLLNNAVRLRIQGCPFLPGGIHLCEVQSHLVVLLLT
AQTVHRLLLPHPARLYRSELITESQVQSVFTDISKIHIRDPSNYYVIPSVPGLAPNSVAS
AAWLSSEGEALFALPSASGGIFVLKLPPPDSPGSVSVVELKQSSVVQRFLTGWMPTAIRG
DGGPSDVPVSLSVHCLDHDAFLFALCQDHKLRMWSYKDQMCLMVADLLEFMPVSRDLRLA
AGTGHRLRLAFSQSLGLYLGVYMHAPKRGQFCVFQLVSTESNRYSLDHISSLFSSQETLV
DFALTSAEIWALWHNEENQTVVKYINFEQNVAGQWNQVFVQPLPEEEVTVRQDQDPREIY
LEYLFMPGRFTNAAIQKALQIFSQGTERHMDLTWDELRKEVTLAVENEFQGSVTEYECSP
EEFWQLQVEFWSKFYACCLQYQEALSRPLALHLNPYTSMVCLLKKGSMSFLVPCSLVDHL
YLLSNEHLLTEDDAAIFEDLEMSRDVVCLVQCLRLIGESISMEMAFIMEMACSRLQPPEK
AAEQILEDLIANDTENVMEDIHSKLQEIRNPIHAIGLLIREMDYETDADMERAPHLALRM
SLSQLFGSSTAAHAVCGGVAKICTVRFLLCRDLLILQQLLLRLGDPMVLGGGQLFQSQQD
LLHRTSPLLLSYFLIRWASQCLASDVPVDTLESNLQHLSVLELADTTALTPHKLVSGPQT
IVELFFQEVARKHIISRLFLQPNTSLAETSLNWPHLITSIVADFLPLLWPSNPSFLFPEC
LMGSCQYTQLQEYIRLLQPWCHVNMGSCCFMMGRCYLVMGEGHKALDCFCQAASEVGREE
FLDRLIQPEEGEVVSTPRLQYYNKVLRLLEMLGLPELVIELATLAIMESADDWRSQATLR
TCIFKHHLDLGHNSEAYVALTQNPDPSRQLDCLRQLVVVLCERSQLQDLVEFPYVNLHNE
VVGIIESHARAVDLMTHNYYELLYAFHVYRHNYRKAGTVMFEYGMRLGREVRTLRGLQKQ
GNCFLAAINCLRLIRPEYAWIVQPASGAVYERPGASPKRSHDGECMDVPTTRQIEILELE
DLERECLLARIRLTLVEHDMSAAAVAGNSTPEETVSLLVRAGLFDSAITLCQTFKLPLTP
IFEGLTFKCIKLQLGGEAAQAKAWDWLAANQLSALVTTKESSATDEAWRLLSSYLERYPS
QNNLYHRCVINKLLAHGIPLPNWLINSYKEVDAAELLRLYLNYDLLEEAVDLVLEYVDAV
LGKGHQYFGIEVPLSPASPTMWLPYTAIDQLLQALRESSASENSVVLYEKLNDRMEDYQQ
KVSVATMERLYCRP
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctctggcggcgcggagctgcctggagctgagcgcggccggccgggccccg
ccgcgatcccctcaggagctgatctttgtgccccccggcgtcgccccgctccccgccggg
cgctacagcgacagcgccggcggcttctgctaccaagagagcgcgcagctcggggccgcc
accaggaatcgctgggtgcgatggagcacgtcgggggacacggtggagctggtggaggaa
tccctggacgtgaacctgctgaacaacgctgtgcggctgcggatccagggctgccccttc
ctgccgggcggcatccacctgtgcgaggtgcagagtcacctggtggtgctgctgctcacg
gcgcagaccgtgcaccgcctgctgctcccgcaccccgcccgcctctaccgcagcgagctg
ataacggagagccaagtgcagtccgtgtttacagatatcagcaaaatccacatcagggat
ccctccaattactacgtgattcccagcgtgccggggctggctcccaactccgtggcctct
gcagcctggctgagcagcgagggggaggctctctttgcccttccctctgcctcaggaggg
atctttgtccttaagctgcctcctcccgattctcctggaagtgtttctgtcgtggagttg
aagcagagctcggtggtgcagcgtttcctcacgggctggatgccaactgccatcagaggt
gatggcggcccctcggatgtgcccgtcagcctctccgtgcactgcctggatcacgatgcc
ttcctgtttgccctctgccaggaccataagctccggatgtggtcctacaaggatcagatg
tgcctgatggtggcggatctgctggaattcatgccggtcagcagggacctgcggctggcg
gccggcaccgggcaccgcctgcgcctggccttctcccagtccctgggcctctacctggga
gtctacatgcacgctcccaagcgagggcagttttgtgtcttccagctggtgagcactgag
agcaaccgctacagccttgaccacatctcctccctgttctcctcacaggagactctggtt
gactttgccttaacttcagctgagatctgggcactgtggcacaacgaggagaaccagact
gttgtgaaatacatcaactttgagcagaatgttgcaggccagtggaaccaggtgtttgtg
cagccgctccctgaggaggaggtgacggtccggcaggatcaggaccccagggaaatctac
ttggaatatctcttcatgccgggccggttcactaatgcagctatccagaaggccttgcag
atcttttctcaaggaactgaaaggcacatggatctgacgtgggacgagttaaggaaagag
gtcaccttagctgtggaaaatgagttccagggcagcgtgacagaatacgagtgctcccca
gaggagttttggcagctgcaggtggaattctggtccaagttctatgcctgctgcctgcag
taccaggaagctctttcccggcccctggccttgcacctgaacccctacaccagcatggtg
tgcctgctaaagaagggctccatgtccttcctcgtgccctgctccttggttgatcatctc
tatctcctctccaacgagcacctcctaaccgaggatgacgctgccatctttgaagatttg
gagatgtctcgtgatgttgtctgtcttgtccagtgccttcgcctgatcggagaatcaatt
tctatggaaatggcattcatcatggaaatggcttgctcccgcctccagcctccagaaaag
gctgcagagcagatcctggaggacttgatagctaatgacacggaaaatgtgatggaggat
atccacagcaaactgcaggagatcaggaaccccatccatgccatcggattgctcatccga
gagatggactacgagacagacgctgacatggaaagagctcctcacctggcgctgcgcatg
agcctgtcccagctgtttggcagcagcaccgcggcgcacgcggtgtgcgggggggtggcc
aagatctgcaccgtccgcttcctcctctgccgggacctgctcatcctccagcagctcctg
ctgcgcctcggagatcccatggttttgggagggggacagctcttccagtcccagcaggac
ttgctgcaccgcacctctcccttgctgctgtcctacttcctgatccggtgggcgagccag
tgcctggcctccgacgtccctgtggacacgctggaatctaatctgcagcatctctctgtg
ttggagttagcagacaccacggctctgacaccacacaaactggtatccggccctcagaca
atcgtggagctcttctttcaggaagtggccagaaaacacatcatatcccgactcttcctg
caaccaaacacctctttggctgagacaagtttgaactggccccaccttatcacctcaata
gtggctgattttctgcctctcctatggcccagcaatcccagcttcctcttcccagagtgc
ctgatggggagctgtcagtacacccagctccaggaatacatccggctgctgcagccatgg
tgccacgtgaacatgggctcctgctgcttcatgatgggcaggtgctacctcgtcatgggg
gaagggcacaaggctttggattgcttctgccaagctgcctctgaggtgggaagagaggag
ttcctggacaggctgatccagcccgaggagggcgaggtggtctccacgccacgcctgcag
tactacaacaaggtacttcgcttgttggagatgctgggtttgccagagctggtcatcgag
ctggccaccctggccatcatggaatcagcagatgactggagaagccaggctactttgagg
acttgcatcttcaaacatcacttggatttgggtcacaatagtgaagcctatgtagcctta
acacaaaacccagatccaagcaggcagctggactgcctacgccagctagtggtggttctc
tgcgagcgatcccagctccaggacctggtggaatttccttacgtgaacctgcacaatgag
gtcgttgggatcatcgagtcccacgctcgggccgtggatctgatgactcacaactactac
gagctgctctacgccttccacgtgtaccggcacaactaccggaaagctggaacagtgatg
tttgagtacggcatgcggctgggcagggaggtgcggacgctccgagggctccagaaacag
gggaattgtttcctggctgccattaactgcctgcggctgatccgcccggaatacgcctgg
atagtacagccagcctctggggctgtgtacgagcgcccgggagcgtccccgaagaggagc
cacgatggggagtgcatggatgttcccaccactcgccagatcgagatcctggagctggag
gatttggagagggagtgtctgctggcacggatccggctcaccctggtggaacacgacatg
tcagcagcagctgtggcaggcaactccacacccgaggaaacggtgtctctgctggtccgg
gctgggctctttgactcggccatcaccctgtgccaaaccttcaagctgcccttgacgccc
atctttgaggggctgaccttcaagtgcatcaagctccagctgggaggggaagcagcacag
gccaaggcctgggactggctggcagccaaccaactctcagccctggtcaccaccaaggag
tccagtgccacagatgaagcctggaggctgctgtcatcctacttggagcgttacccatcc
cagaacaacctgtaccatcgctgcgtcatcaacaagctcctggcacacgggatacctctg
cccaactggctcattaacagctacaaggaagtggacgctgccgagctgctgcgcctgtac
ctgaactatgatctgctggaggaggccgtggatttggttctggagtacgtggatgctgtg
ctgggcaaagggcaccagtattttgggatcgaggtgcctctgtccccagcgtcccccacg
atgtggcttccctacactgccatagaccagctgctgcaggcgctgcgggagagcagcgcc
agcgagaacagcgtcgtgctctatgagaagctgaacgacaggatggaggactaccagcag
aaggtcagcgtggccaccatggagcgcctgtactgccggccctaa
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