Pyrgilauda ruficollis (rufous-necked snowfinch): 121353450
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Entry
121353450 CDS
T07608
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121353450 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pruf03041
]
121353450 (PRPF40A)
Spliceosome [BR:
pruf03041
]
Complex A
U1 snRNP components
U1 related factors
121353450 (PRPF40A)
Complex B
121353450 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
121353450
NCBI-ProteinID:
XP_041323251
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MSGGDSTAAAAAASPQPLPFSLPKPPPLMQLTPGDAVRPVGSGADQSPKSARLAARPDWP
AGKPVSLLAPLLPPRGEPEPLLPFGPAAPRPPLRGRLLGRCGGSLLSPAMRPGGVDRGSL
MMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMM
MSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVSTVQQSSTTTSSASEEHSKQKS
TWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQT
KESRWAKPKELEDLEAMIKAEENSTKPEDAAAAASAPAADAPSGARVFPLKASAAAKKED
EDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKK
QAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNA
ISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYCTTWSEAQQYLM
DNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQLFL
DELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTALDLFKFYVEDLKARYHDEKKI
IKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFNSLLEKAEAREREREKE
EARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPAFEDITLESERKRIFKDFLH
VLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDDSHSKKKRQRSESRSVSERSS
SAESERSYKKSKKHKKKSKKRRHKSDSPESDVEREKDKKERERDSEKERARQRSESKHKS
PTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggggactccacggccgcggccgccgccgcctccccgcagccgctgccgttc
tcgctgccgaagccgccgcccctcatgcagctgacgccgggcgacgccgtgcggccggtg
ggctcgggcgccgaccaatcgccgaagagcgcgcggctggcggcgcgccccgattggccg
gcggggaagcccgtcagcctgctggcgccgctgctcccgccccgcggggagcccgagccg
ctgctgcccttcgggcccgcggccccgcggccgccgctgcgcgggcgcctcctgggccgc
tgcgggggctccctgctcagccccgccatgcggcccggcggcgtcgaccgcggctctctc
atgatgggccacccgggaatgccccactacccccccatggggatgcaccccatgggccag
agacctcccaacatgcccccggttccccacgggatgatgcctcagatgatgccccccatg
ggaggacccccgatggggcagatgcctggaatgatgcagtcggtgatgcctggaatgatg
atgtcccacatgtcccaggctgccatgcagcccacggttcctccgggagtgaacagcatg
gatgcacaagtaggtgtgacccctccagggactcagacaacgcatcccgtggtctccaca
gtgcagcagagctccaccaccaccagctctgccagcgaggagcactccaagcagaaatcc
acgtggacggagcacaaatctccagatggaagaacttactactacaacaccgagaccaag
cagtccacgtgggagaagccagatgacctcaaaacccctgctgagcaattgttgtccaag
tgtccctggaaggagtataaatcagattctgggaagccttattattacaattcccaaaca
aaggaatcccgctgggcaaaacccaaagagctggaggatcttgaagcaatgattaaagct
gaagaaaacagcacgaagccggaggacgcggctgccgccgcctcggctccggccgcggac
gctccgagcggggccagggtcttcccacttaaagcaagtgctgctgcaaagaaggaggat
gaggatgcccaaccagttaaaaaaacctacacgtggaacacaaaggaagaggccaaacaa
gcatttaaagaactgctaaaagaaaagcgggttccatccaatgcttcctgggagcaggcc
atgaaaatgatcattaatgaccccagatacagtgctttggcaaaactgagtgaaaagaag
caggcctttaatgcctacaaagttcagacagagaaggaggagaaggaagaagccagatcc
aagtacaaggaggccaaggaatccttccagcgcttcctggaaaaccatgagaagatgaca
tccaccaccagatacaaaaaagctgaacagatgtttggggagatggaagtgtggaatgcc
atatccgagcgggaccggctggagatttatgaggatgttctgttcttcctgtccaagaag
gagaaggaacaagccaagcagctgcggaagaggaactgggaagctctgaagaacatcctg
gataacatggccaacgtcacctactgcaccacctggtcagaggcccagcagtacctcatg
gacaaccccacctttgctgaggatgaggagctccagaacatggacaaggaggatgccctg
atctgttttgaggaacatatcagggccttggagaaagaggaggaggaagagaagcagaaa
agtttgctgagggaaaggaggaggcagcgtaaaaaccgggaatctttccagctgtttctg
gatgagctgcacgagcatggacagttacactccatgtcctcctggatggaattgtaccca
gccatcagctctgacatcagattcaccagcatgctcggccagcctggatcaacggcgctt
gacctgttcaagttttatgtggaggatttaaaagctcgttaccacgacgagaagaagata
attaaagacatcttaaaggataaaggatttgtggtggaggtgaacacttcctttgaggat
tttgtcactgtcatcagctctactaaaagagccaccacgttggatgcagggaatatcaaa
ctggctttcaacagtctgctggagaaggcggaagcgcgggagcgcgagcgggagaaggag
gaggcccggaagatgaagaggaaggaatcagccttcaagagcatgctgaaacaagccacc
cctcccatcgagctggatgctgtctgggaggatatcagagacagatttgtgaaggaacca
gcatttgaagacatcaccctggaatctgaaaggaaaaggatatttaaggatttccttcat
gtacttgagcacgagtgccaacaccaccactccaagaccaagaaacattcgaagaaatcc
aaaaaacaccaccggaagcgctcgcgctcccgctccggctcagagtccgaggatgacgac
agccactccaagaagaagcggcagcgctcggaatcgcggtcggtgtccgagcgttcgtcc
agcgccgagtccgagaggagttacaagaagtccaaaaaacacaagaagaagagcaagaag
aggaggcacaagtctgattcaccagaatctgatgtggaacgagagaaggacaagaaggaa
agagagagggacagtgagaaggaaagagccagacagagatctgagtccaagcataaatct
cccactaaaaaacggcctggaaaagattccggaaactgggatacctctggcagcgagctc
agcgagggcgagctggaaaaacagaggaggactcttttggagcagctggatgaagatcaa
tga
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