Polymorphospora rubra: Prubr_26000
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Entry
Prubr_26000 CDS
T07190
Name
(GenBank) epimerase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pry
Polymorphospora rubra
Pathway
pry00521
Streptomycin biosynthesis
pry00523
Polyketide sugar unit biosynthesis
pry00525
Acarbose and validamycin biosynthesis
pry00541
Biosynthesis of various nucleotide sugars
pry01055
Biosynthesis of vancomycin group antibiotics
pry01100
Metabolic pathways
pry01110
Biosynthesis of secondary metabolites
pry01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Prubr_26000
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Prubr_26000
01055 Biosynthesis of vancomycin group antibiotics
Prubr_26000
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Prubr_26000
00525 Acarbose and validamycin biosynthesis
Prubr_26000
Enzymes [BR:
pry01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Prubr_26000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_10
NAD_binding_4
DUF7126
adh_short
NmrA
Motif
Other DBs
NCBI-ProteinID:
BCJ65579
UniProt:
A0A810N032
LinkDB
All DBs
Position
complement(2742398..2743375)
Genome browser
AA seq
325 aa
AA seq
DB search
MVVAQRYGQGNRILVTGGAGFMPSHLIDALLARGCTVVAVDNFVTGSKNNVAHLAENPLF
TLVEADVSDGLPVHHPAVADRFDAIMHMASPASPKDFATLPIEILRVGSLATIHLLERAV
TDGARFIMASTSEAYGDPLVHPQPESYWGNVNPVGIRSVYDEAKRFAEATTMAYHRYRGA
DVGIVRIFNTYGPRMRPDDGRAIPTFITQALRGEPITVHGTGTQTRSICYVDDLVKGILL
LLDSTETGPINCGTEHEVTMRDLAELIVSLTGSASTVTYLTRTADDPEMRRPDLTLARER
LGYTPSVPPEDGLRRTIAHFSGQMS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggtggtagctcaacgttacggacaaggtaaccggatcctggtcaccggcggtgcgggc
ttcatgccgtcccatctcatcgatgcgctgttggcccggggttgcacggtcgtcgcggtc
gacaacttcgtgaccggttccaagaacaacgtcgcccacctggccgagaacccgctgttc
acactggtggaggccgatgtctcggacggccttccggtgcaccacccggccgtcgccgac
cggttcgacgcgatcatgcacatggcgtcgccggccagcccgaaggacttcgccacgctg
ccgatcgaaattctgcgggtcggttcgctggccacgatccacctgctggagcgggccgtc
accgacggtgcccggttcatcatggcgtcgacgtccgaggcgtacggcgacccgctggtc
cacccgcagccggagtcgtactggggcaacgtcaacccggtcggcatccgcagcgtctac
gacgaggccaagcggttcgccgaggccacgacgatggcctaccaccgctaccggggcgcc
gacgtcgggatcgtacggatcttcaacacctacggtccgcggatgcggccggacgacggc
cgggcgatcccgacgttcatcacccaggcgctgcgtggtgagccgatcacggtgcacggc
accggcacccagacccggtcgatctgctacgtcgacgacctcgtcaagggcatcctgctg
ctgctcgactcgaccgagaccgggccgatcaactgcggcaccgagcacgaggtcacgatg
cgggacctggcggagctgatcgtgtcgctgaccggcagtgcctcgacggtcacctacctg
acccgcaccgccgacgacccggagatgcgccggcccgatctgaccctggcccgggaacgg
ctcggttataccccgtccgtaccgcccgaggacggtctgcgacgcacgatcgcccacttc
agtggccagatgagctga
Polymorphospora rubra: Prubr_41860
Help
Entry
Prubr_41860 CDS
T07190
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pry
Polymorphospora rubra
Pathway
pry00521
Streptomycin biosynthesis
pry00523
Polyketide sugar unit biosynthesis
pry00525
Acarbose and validamycin biosynthesis
pry00541
Biosynthesis of various nucleotide sugars
pry01055
Biosynthesis of vancomycin group antibiotics
pry01100
Metabolic pathways
pry01110
Biosynthesis of secondary metabolites
pry01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Prubr_41860 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Prubr_41860 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
Prubr_41860 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Prubr_41860 (rmlB)
00525 Acarbose and validamycin biosynthesis
Prubr_41860 (rmlB)
Enzymes [BR:
pry01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Prubr_41860 (rmlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
NmrA
Quaking_NLS
Motif
Other DBs
NCBI-ProteinID:
BCJ67165
UniProt:
A0A810N6W7
LinkDB
All DBs
Position
4525956..4526951
Genome browser
AA seq
331 aa
AA seq
DB search
MRMLVTGGAGFIGANFVHQTLDRLPGVELTVLDALTYAGDRASLAAVEDRITFVHGSVTD
AALVDDLVSRSDTVVHFAAESHNDNSVAQPWPFVETNIVGTYHLLTSVRRHDVRLHHIST
DEVFGDLELDDPARFTEHTAYNPSSPYSSTKAGADLLVRAWVRSYGVRATISNCSNNYGP
FHHVEKFIPRQITNIIDGVRPKIYGTGRNVRDWIHVDDHNSAVLAILERGRIGETYLIGA
ECEVDNLTVVAELLELLDRPRDWFDLVSDRPGHDLRYAIDPGKLRAELDWKPSYTSFRDG
LAQTVDWYRANEAWWRPKKEKTERRYAELGR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcggatgctcgtgaccggcggagccggtttcatcggagcgaacttcgtacaccagacc
ctcgaccgcctgcccggcgtcgagttgacggtgctcgatgcgttgacgtacgccggtgac
cgggcgagcctcgccgcggtcgaggaccggatcaccttcgtgcacggcagcgtcaccgac
gccgcgctcgtcgacgacctcgtctcccggtccgacaccgtggtccacttcgccgccgag
tcgcacaacgacaactcggtcgcgcagccgtggccgttcgtcgagaccaacatcgtcggc
acctaccacctgctgaccagcgtgcgccggcacgacgtacggctgcaccacatctcgacc
gacgaggtcttcggcgacctcgaactcgacgacccggcccggttcacggagcacaccgcc
tacaacccgtcgagcccgtactcgtcgaccaaggccggcgccgacctgctggtccgggcc
tgggtgcggtcctacggcgtacgcgcgacgatctcgaactgctcgaacaactacgggccg
ttccaccacgtcgagaagttcatcccgcgccagatcaccaacatcatcgacggcgtacgg
ccgaagatctacggcaccgggcggaacgtgcgtgactggatccacgtcgacgaccacaac
agcgcggtgctcgcgatcctcgagcgcggccggatcggcgagacctacctgatcggcgcg
gagtgcgaggtcgacaacctgaccgtggtcgccgaactgctcgagctgctcgaccggccg
cgtgactggttcgacctggtcagtgaccgtcccggccacgatctgcgctacgcgatcgat
cccgggaagctgcgcgccgaactcgactggaagccgtcgtacaccagcttccgggacggg
ttggcgcagacggtcgactggtaccgggccaacgaggcgtggtggcggccgaagaaggag
aagaccgagcgtcgctacgccgaactcggccgctga
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