KEGG   Polymorphospora rubra: Prubr_26000
Entry
Prubr_26000       CDS       T07190                                 
Name
(GenBank) epimerase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
pry  Polymorphospora rubra
Pathway
pry00521  Streptomycin biosynthesis
pry00523  Polyketide sugar unit biosynthesis
pry00525  Acarbose and validamycin biosynthesis
pry00541  Biosynthesis of various nucleotide sugars
pry01055  Biosynthesis of vancomycin group antibiotics
pry01100  Metabolic pathways
pry01110  Biosynthesis of secondary metabolites
pry01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:pry00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    Prubr_26000
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    Prubr_26000
   01055 Biosynthesis of vancomycin group antibiotics
    Prubr_26000
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    Prubr_26000
   00525 Acarbose and validamycin biosynthesis
    Prubr_26000
Enzymes [BR:pry01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     Prubr_26000
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_10 NAD_binding_4 DUF7126 adh_short NmrA
Other DBs
NCBI-ProteinID: BCJ65579
UniProt: A0A810N032
LinkDB
Position
complement(2742398..2743375)
AA seq 325 aa
MVVAQRYGQGNRILVTGGAGFMPSHLIDALLARGCTVVAVDNFVTGSKNNVAHLAENPLF
TLVEADVSDGLPVHHPAVADRFDAIMHMASPASPKDFATLPIEILRVGSLATIHLLERAV
TDGARFIMASTSEAYGDPLVHPQPESYWGNVNPVGIRSVYDEAKRFAEATTMAYHRYRGA
DVGIVRIFNTYGPRMRPDDGRAIPTFITQALRGEPITVHGTGTQTRSICYVDDLVKGILL
LLDSTETGPINCGTEHEVTMRDLAELIVSLTGSASTVTYLTRTADDPEMRRPDLTLARER
LGYTPSVPPEDGLRRTIAHFSGQMS
NT seq 978 nt   +upstreamnt  +downstreamnt
atggtggtagctcaacgttacggacaaggtaaccggatcctggtcaccggcggtgcgggc
ttcatgccgtcccatctcatcgatgcgctgttggcccggggttgcacggtcgtcgcggtc
gacaacttcgtgaccggttccaagaacaacgtcgcccacctggccgagaacccgctgttc
acactggtggaggccgatgtctcggacggccttccggtgcaccacccggccgtcgccgac
cggttcgacgcgatcatgcacatggcgtcgccggccagcccgaaggacttcgccacgctg
ccgatcgaaattctgcgggtcggttcgctggccacgatccacctgctggagcgggccgtc
accgacggtgcccggttcatcatggcgtcgacgtccgaggcgtacggcgacccgctggtc
cacccgcagccggagtcgtactggggcaacgtcaacccggtcggcatccgcagcgtctac
gacgaggccaagcggttcgccgaggccacgacgatggcctaccaccgctaccggggcgcc
gacgtcgggatcgtacggatcttcaacacctacggtccgcggatgcggccggacgacggc
cgggcgatcccgacgttcatcacccaggcgctgcgtggtgagccgatcacggtgcacggc
accggcacccagacccggtcgatctgctacgtcgacgacctcgtcaagggcatcctgctg
ctgctcgactcgaccgagaccgggccgatcaactgcggcaccgagcacgaggtcacgatg
cgggacctggcggagctgatcgtgtcgctgaccggcagtgcctcgacggtcacctacctg
acccgcaccgccgacgacccggagatgcgccggcccgatctgaccctggcccgggaacgg
ctcggttataccccgtccgtaccgcccgaggacggtctgcgacgcacgatcgcccacttc
agtggccagatgagctga

KEGG   Polymorphospora rubra: Prubr_41860
Entry
Prubr_41860       CDS       T07190                                 
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
pry  Polymorphospora rubra
Pathway
pry00521  Streptomycin biosynthesis
pry00523  Polyketide sugar unit biosynthesis
pry00525  Acarbose and validamycin biosynthesis
pry00541  Biosynthesis of various nucleotide sugars
pry01055  Biosynthesis of vancomycin group antibiotics
pry01100  Metabolic pathways
pry01110  Biosynthesis of secondary metabolites
pry01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:pry00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    Prubr_41860 (rmlB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    Prubr_41860 (rmlB)
   01055 Biosynthesis of vancomycin group antibiotics
    Prubr_41860 (rmlB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    Prubr_41860 (rmlB)
   00525 Acarbose and validamycin biosynthesis
    Prubr_41860 (rmlB)
Enzymes [BR:pry01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     Prubr_41860 (rmlB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 NAD_binding_10 NmrA Quaking_NLS
Other DBs
NCBI-ProteinID: BCJ67165
UniProt: A0A810N6W7
LinkDB
Position
4525956..4526951
AA seq 331 aa
MRMLVTGGAGFIGANFVHQTLDRLPGVELTVLDALTYAGDRASLAAVEDRITFVHGSVTD
AALVDDLVSRSDTVVHFAAESHNDNSVAQPWPFVETNIVGTYHLLTSVRRHDVRLHHIST
DEVFGDLELDDPARFTEHTAYNPSSPYSSTKAGADLLVRAWVRSYGVRATISNCSNNYGP
FHHVEKFIPRQITNIIDGVRPKIYGTGRNVRDWIHVDDHNSAVLAILERGRIGETYLIGA
ECEVDNLTVVAELLELLDRPRDWFDLVSDRPGHDLRYAIDPGKLRAELDWKPSYTSFRDG
LAQTVDWYRANEAWWRPKKEKTERRYAELGR
NT seq 996 nt   +upstreamnt  +downstreamnt
atgcggatgctcgtgaccggcggagccggtttcatcggagcgaacttcgtacaccagacc
ctcgaccgcctgcccggcgtcgagttgacggtgctcgatgcgttgacgtacgccggtgac
cgggcgagcctcgccgcggtcgaggaccggatcaccttcgtgcacggcagcgtcaccgac
gccgcgctcgtcgacgacctcgtctcccggtccgacaccgtggtccacttcgccgccgag
tcgcacaacgacaactcggtcgcgcagccgtggccgttcgtcgagaccaacatcgtcggc
acctaccacctgctgaccagcgtgcgccggcacgacgtacggctgcaccacatctcgacc
gacgaggtcttcggcgacctcgaactcgacgacccggcccggttcacggagcacaccgcc
tacaacccgtcgagcccgtactcgtcgaccaaggccggcgccgacctgctggtccgggcc
tgggtgcggtcctacggcgtacgcgcgacgatctcgaactgctcgaacaactacgggccg
ttccaccacgtcgagaagttcatcccgcgccagatcaccaacatcatcgacggcgtacgg
ccgaagatctacggcaccgggcggaacgtgcgtgactggatccacgtcgacgaccacaac
agcgcggtgctcgcgatcctcgagcgcggccggatcggcgagacctacctgatcggcgcg
gagtgcgaggtcgacaacctgaccgtggtcgccgaactgctcgagctgctcgaccggccg
cgtgactggttcgacctggtcagtgaccgtcccggccacgatctgcgctacgcgatcgat
cccgggaagctgcgcgccgaactcgactggaagccgtcgtacaccagcttccgggacggg
ttggcgcagacggtcgactggtaccgggccaacgaggcgtggtggcggccgaagaaggag
aagaccgagcgtcgctacgccgaactcggccgctga

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