Paenibacillus sabinae: PSAB_21705
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Entry
PSAB_21705 CDS
T03064
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
psab
Paenibacillus sabinae
Pathway
psab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSAB_21705 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psab03021
]
PSAB_21705 (rpoB)
03400 DNA repair and recombination proteins [BR:
psab03400
]
PSAB_21705 (rpoB)
Enzymes [BR:
psab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSAB_21705 (rpoB)
Transcription machinery [BR:
psab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSAB_21705 (rpoB)
DNA repair and recombination proteins [BR:
psab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSAB_21705 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AHV99230
UniProt:
X4ZRY8
LinkDB
All DBs
Position
complement(4703228..4706638)
Genome browser
AA seq
1136 aa
AA seq
DB search
MFQDISPIQDFTGNLVLEFIDYSLGEPKYTVDDAKERDVTYAAPLRVKVRLINKETGEVK
EQEVFMGDFPLMTETGTFIINGAERVIVSQLVRSPSVYFSTKVDKNGKKTYTATVIPNRG
AWLELETDAKDIMYVRIDRTRKIPVTVLLRALGFGSDAEILDLLGNDEYIRNTLDKDNTD
STEKALIEIYERLRPGEPPTLDNAKSLLVARFFDPKRYDLANVGRYKINKKLHIKNRLFN
QRLAQPLVDESTGEILGETGQMVDRRLLDKLLPYFEQQDMAAKTYRVSGGVLDNEDIPLQ
TVEVFSPIEEGRVIKLIANGNIDKSVKHITQADIISSISYFINLLHGIGNTDDIDHLGNR
RLRSVGELLQNQFRIGLSRMERVVRERMSIQDANAITPQALINIRPVIASIKEFFGSSQL
SQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGL
INSLSTFARINEYGFIEAPYRWVDPKTGQVTEQIDYLTADEEDNYVVAQANAELTEEGAF
ADEMVIVRYNKLSDNITTMPSSRVDYMDVSPKQVVSVATALIPFLENDDSNRALMGSNMQ
RQAVPLLIPKAPLVGTGMEHKSAKDSGVCIVSKYDGIIERSSANEIWLRRVETVDGKEVK
GDIVKYKLHKFMRSNQGTCINQRPLAKRGDIVKKGDILADGPSTEMGELALGRNVVVAFM
TWEGYNYEDAILLSEKLVKEDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALRNL
DERGIIRIGAEISAGDILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGSD
GIIVDVKVFTRENGDELPPGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVVARILPEEDM
PFLPDGTPVQVVLNPLGVPSRMNIGQVLEVHLGFAAMRLGIHVATPVFDGAREYDVFDTM
EEAGMQRNGKTILYDGRTGERFEREVTVGVMHMIKLAHMVDDKIHARSTGPYSLVTQQPL
GGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGV
PESFKVLIKELQSLGMDVKILSGDEQEIEMKELDDEDETSSDKLSLNLEGAEVGVE
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggacatctcgccgattcaggatttcacgggcaacctggtgctggagttcatt
gattacagcttgggcgaaccgaagtatacggtggatgacgccaaagagcgtgacgtgacg
tatgcggcgccgcttcgggtgaaggtgcgactcatcaacaaggagaccggagaggtcaag
gaacaggaagtgttcatgggagatttcccgctgatgacggagaccggtacgtttattatt
aacggtgcggaacgggtaattgtcagccagttggttcgctctcctagcgtctactttagc
actaaagtggataagaacggcaaaaaaacctataccgccacagtcatcccgaaccgcgga
gcctggctggagctggagaccgacgcgaaggacatcatgtatgtccggatcgaccgtacc
cggaaaattccggttaccgtgctgctgcgtgctctcggattcggcagcgacgccgaaatt
ctggatctgcttggcaatgatgaatatattcgcaataccctggataaggacaacacggac
tccacggaaaaagcgctcatcgaaatttacgagcgtcttcgtccgggtgaaccgccgaca
ctcgataacgccaagagcttgctcgtcgcgcgtttcttcgatccgaagcgttacgatctg
gcgaacgtgggccgctacaaaatcaacaagaagctccacatcaagaaccgtcttttcaac
cagcgtctggctcagcctttggtggatgagtcgaccggggagattctgggcgaaaccggt
caaatggtcgaccgccgtctccttgataaactgctgccgtacttcgagcagcaggatatg
gctgcgaagacttaccgcgtaagcggaggtgtgctcgataatgaggatattcctcttcag
acggtcgaggtgttctcgccgattgaagaaggtcgtgtgatcaagctgatcgctaacggc
aatatcgataaatcggtcaagcatatcacccaggctgatattatctcctcaatcagctac
tttattaatctgcttcacggcatcggcaataccgatgatatcgaccatttgggcaaccgt
cgtctgcgttccgtgggcgagcttctgcagaaccagttccgtatcggtctttcacggatg
gaacgcgtagtgcgggagagaatgtcgattcaggacgcgaacgcgatcacgccgcaggcg
ctgattaatatccgtccggttatcgcgtcgattaaggagttcttcggaagctcccagctg
tcgcagtttatggaccagacgaatccgcttgcggagctgacgcataaacgccgtttgtcc
gcgctcggtccgggcggtctgacacgtgagcgcgcgggctttgaggttcgcgacgtccat
cacagtcactacggccggatgtgtccgatcgagaccccggaaggtccgaacatcggtctg
atcaactccctgtcgactttcgcccgcattaacgagtatggcttcatcgaagcgccgtac
cgttgggtcgatccgaagacgggacaggtcactgaacaaatcgattacctcacggcagac
gaggaagataattacgtagtcgctcaggcgaatgccgagttgacggaggaaggcgcgttt
gcggatgagatggttatcgtccgttacaacaagctgtccgacaacatcacgacaatgccg
agcagccgagtagattacatggacgtttcgccaaaacaggttgtatccgtcgcgacggcg
ctcattccgttccttgagaacgatgactccaaccgtgcgctgatgggttccaacatgcag
cggcaggccgttccgctgctcattccgaaagcgccgctcgtcggcacgggaatggagcat
aaatccgctaaagattcgggcgtatgtatcgtttccaaatacgacggcatcatcgagcgc
tcgtcggccaacgaaatctggctgcggcgcgttgagaccgtcgacggcaaagaagttaaa
ggcgacattgttaaatataaattacacaaatttatgcgttcgaaccaaggaacctgcatt
aaccagcgtcctctggccaagagaggcgatatcgtcaagaaaggcgacatcctggcagac
ggtccttccacggaaatgggcgaattggctctgggtcgcaacgttgtcgttgcgttcatg
acgtgggaaggctacaactacgaggatgccatcctacttagcgagaagctggttaaagag
gatgtatacacttcgatccatatcgaggaatacgaatccgaagcgcgggatacaaagctc
ggaccggaagaaattacgcgtgacattccgaacgtgggcgaggaagctcttcgcaatctg
gatgagcgcggtattatccggatcggtgccgaaattagcgctggcgacattctcgtcggc
aaggttacgccaaaaggcgtaacggagctgacggcggaagaacgtctcctgcatgctatc
ttcggcgagaaggcacgtgaagtgcgcgatacctctctccgtgttcctcacggtagtgat
ggtatcatcgtcgatgtcaaagtgtttactcgcgagaacggcgacgagctgcctcctggc
gtaaaccagctggttcgtgtctatatcgcccagaagcgtaaaatttccgaaggcgacaaa
atggccggacgtcacggcaacaagggtgtcgtagcccgtattctgcctgaagaagatatg
ccgttcctgccggacggaacaccggtgcaggttgtgctcaacccgctgggcgttccttcg
cggatgaacattggtcaggtgctggaagttcaccttggcttcgcggccatgcgcctgggt
atccacgtcgcaacgccggtattcgacggagctcgtgagtacgacgtcttcgacacgatg
gaagaagccggaatgcagcgcaacggtaagaccatcctgtatgacggacggacaggtgag
cgtttcgaacgcgaagttaccgtcggcgtcatgcacatgatcaagctggcgcacatggtt
gacgataaaatccatgcccgttccacgggaccatactcgctcgttacgcagcagccactc
ggcggtaaagcccagttcggcggacagcgtttcggggagatggaagtatgggcgcttgaa
gcctacggcgcagcctatacgctgcaagagattcttacggttaaatccgatgacgtggtt
ggccgtgtgaagacctacgaatccattgtcaaaggcgagaatgtgccggagccgggcgtt
cctgagtccttcaaagtattgatcaaagagcttcagtctctcggtatggatgtcaaaatc
ctgagcggcgacgagcaagagatcgaaatgaaggaactggacgacgaggatgagacttca
agcgacaagctgagcctcaatctggaaggtgcggaagtcggagtggaataa
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integrated database retrieval system
