Piscirickettsia salmonis: PSLF89_2
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Entry
PSLF89_2 CDS
T03982
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
psal
Piscirickettsia salmonis
Pathway
psal03030
DNA replication
psal03430
Mismatch repair
psal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSLF89_2
03430 Mismatch repair
PSLF89_2
03440 Homologous recombination
PSLF89_2
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psal03032
]
PSLF89_2
03400 DNA repair and recombination proteins [BR:
psal03400
]
PSLF89_2
Enzymes [BR:
psal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSLF89_2
DNA replication proteins [BR:
psal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSLF89_2
DNA repair and recombination proteins [BR:
psal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSLF89_2
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AKP72223
LinkDB
All DBs
Position
complement(3182194..3183300)
Genome browser
AA seq
368 aa
AA seq
DB search
MKFTVQRDALLKPLQMLAGVVERRHTLPILSHILFDIQVDRLQLTASDLEIELIARVQAG
FRGGDGLGQFTLPAKKVVDIVKNIAEDILIEFHVEGERVTLSAERSRFSLSSLAAHEFPV
LDSVSHGTGLALSQENLKYLFERVAFSMAQQDVRHYLNGMLLEADNNILRAVATDGHRIA
LASVPMSVQVSDKKQVILPRKGVQELTRLLNLQSEIELTLTENHLRIFTDEFTFSSKLIE
GKFPDYRRVIPESNDQLVLVDRDALKQALVRVVILSNEKYRGVRMELSTNTLKMGANNPE
QEEAEDYLEVSYEGRPLEIGFNASYLQDILSVLSPGPVRLLLKDATASVLIQESADADAC
YVVMPMRL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacggtacagcgggatgccttattaaagcctttacaaatgttagctggtgtt
gtcgagcgacgtcatactttgcctatattaagccatattttatttgatattcaggtggat
cgtttacagttaactgcgagtgatttagagatagagttaattgctcgtgtgcaggctggc
tttcgtggtggtgatgggctgggccaatttacgttgccggcaaaaaaagtagtcgatatt
gttaaaaatattgctgaagatatattaattgaatttcatgttgaaggtgagcgagtgaca
ttaagcgcagaacgtagtcgttttagcttatcatcattggccgctcatgagtttcctgtg
cttgattcagtcagtcatgggactggtttggctttgagtcaggaaaacttaaagtattta
tttgagcgcgttgctttttctatggctcagcaggatgttcgtcattatctaaatggtatg
ttgcttgaggcagacaataatattttgcgagctgtggcgacggatgggcatcgaattgcc
ttagcatctgtgcctatgagtgttcaagtatctgataaaaaacaagttattttaccacgt
aagggagtgcaagaacttactcgtttattaaatttgcagagcgagattgagttgactctg
acagaaaatcatttacgtatatttacagatgaatttactttctcatctaaattaattgaa
ggaaaatttccagactatcgtcgagtgattcctgaaagtaatgatcaacttgtattggtt
gatcgggatgcattaaagcaagctcttgttcgggtggtgattttatccaatgaaaaatac
cgtggtgtacgcatggaattaagtacgaatacgctaaaaatgggtgcgaataacccagag
caagaagaagccgaagattatcttgaagtcagttacgaggggagacctttagaaattggt
tttaatgcatcatatttgcaagatattctcagcgtgttaagtccagggccggtgcgcttg
ttgctcaaggatgcgactgcaagtgtacttattcaagagtcagcagatgctgatgcctgc
tatgttgttatgccgatgcgtctttag
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