Paracoccus sanguinis: HGN31_09385
Help
Entry
HGN31_09385 CDS
T07521
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
psan
Paracoccus sanguinis
Pathway
psan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HGN31_09385 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psan03021
]
HGN31_09385 (rpoB)
03400 DNA repair and recombination proteins [BR:
psan03400
]
HGN31_09385 (rpoB)
Enzymes [BR:
psan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HGN31_09385 (rpoB)
Transcription machinery [BR:
psan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HGN31_09385 (rpoB)
DNA repair and recombination proteins [BR:
psan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HGN31_09385 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
QJD17052
LinkDB
All DBs
Position
1961521..1965675
Genome browser
AA seq
1384 aa
AA seq
DB search
MAQAYVGQKRIRRYYGNIREVLEMPNLIEVQKASYDLFLNSGEGTGHNDGEGIQGVFQSV
FPIKDFNETATLEFVKYELEKPKYDVDECQQRDMTYAAPLKVTLRLIVFDVDENSGTRAV
KDIKEQDVYMGDMPLMTQNGTFIVNGTERVVVSQMHRSPGVFFDHDRGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDLVFARIDRRRKLPVTTLLYALGMDQDAIMSSFYETVTYKLKK
GKKGEAGAWVTRFFPERVRGTRPSYDLVNADTGEVITKAGDKVTPRLVKKLLESGEVTNL
LVPFERIVGRYVAHDIINEETGLIYAEAGDEITAEYSKDGTELTGGTLKTLLDNNITDIP
VLDIDHVNVGPYIRNTMAADKNMNRDGALMDIYRVMRPGEPPTVEAASVLFNSLFFDSER
YDLSAVGRVKMNMRLDLDAPDTQRTLRHEDIIACVRGLVELRDGKGEIDDIDHLGNRRVR
SVGELMENQYRIGLLRMERAIRERMSGVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQF
MDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGQNIGLINS
LATYARVNKYGFIETPYRKVVDGKVTDEVQYISATEEMRHTIAQANAELDDEGRFTQELI
STRQAGDFTLNPVDAIDMIDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLR
AEAPFVGTGMEATVARDSGAAIMARRGGVIDQVDASRIVVRATEDLGAGDAGVDIYRLRK
FKRSNQSSTINQRPLIKVGDKVQKGQVIADGPSTDQGELAIGRNVVVAFMPWNGYNYEDS
ILISERIHRDDVFTSIHIDEYEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGA
EVGPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGAYGTIVEVRVFN
RHGVDKDERAIQIEREEIERLSRDRDDEQAILERNIYARLKSLISGQTAVKGPKGVKANS
VIDDDLLGSLSRGQWFQLALADEAAAREVEALQDQFNVQKKALEARFDDKVEKVRQGDDL
PPGVMKMVKVFVAVKRKLQAGDKMAGRHGNKGVVSKVVPMEDMPFLADGTPVDLVLNPLG
VPSRMNVGQILETHMGWAARGLGIRIDEALQEFRDKGDLTPVREAMRIGYGDETFASEFG
DMTDEDLVEHAEAVRGGVPIATPVFDGAKEADVNDALTRAGFDASGQSIVFDGRTGEQFT
RPVTVGVKYILKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYG
AAYTLQEMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDA
EEDE
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcttacgtcggtcagaagcgcatccggcgctattacggcaacattcgcgaa
gttcttgagatgccgaacctcatcgaggttcagaaggcgtcctacgacctgttcctcaac
tcgggcgaaggcaccggccacaacgacggcgagggcatccagggggtgttccagtcggtg
ttcccgatcaaggatttcaacgagaccgcgacgctcgagttcgtgaaatacgagctcgag
aagccgaaatacgacgtcgacgagtgccagcagcgcgacatgacctatgccgcgccgctc
aaggtgacgctgcgcctgatcgtgttcgatgtcgacgagaactcgggcacccgcgccgtc
aaggacatcaaggagcaggacgtctacatgggcgacatgcccctgatgacgcagaacggc
acgttcatcgtgaacgggaccgagcgggtcgtcgtcagccagatgcaccgctcgccgggc
gtgttcttcgaccacgaccgcggcaagacccattcctcgggcaagctgctgttcgcgtgc
cggatcatcccctatcgcggctcgtggctcgacttcgagttcgacgccaaggacctcgtg
ttcgcgcgcatcgaccggcgccgcaagctgccggtgacgacgctgctctatgcgctcggc
atggaccaggacgcgatcatgtcgtcgttctacgagacggtcacctacaagctcaagaag
ggcaagaagggcgaggctggcgcctgggtcacgcggttcttccccgagcgcgtgcgcggc
acccggccgagctatgacctggtcaacgccgacaccggcgaggtcatcaccaaggccggc
gacaaggtcaccccgcggctggtcaagaagctgctggagtcgggcgaggtcactaacctg
ctcgtcccgttcgagcggatcgtgggccgctacgtcgcccatgacatcatcaacgaagag
accggcctgatctacgccgaagccggcgacgagatcaccgcggagtattccaaggacggc
accgagctgaccggcgggacgctcaagacgctgctcgacaacaacatcaccgacattccg
gtgctggacatcgaccacgtcaacgtcggcccctacatccgcaacaccatggcggccgac
aagaacatgaaccgcgacggcgcgctcatggacatctaccgggtcatgcgcccgggcgag
ccgccgaccgtcgaggcggccagcgtgctgttcaactcgctgttcttcgacagcgagcgc
tatgacctgtccgccgtgggccgggtcaagatgaacatgcgcctcgacctcgatgcgccg
gacacccagcgcaccctgcgccacgaggacatcatcgcctgcgtccgcgggctggtggaa
ctgcgcgacggcaagggcgagatcgacgacatcgaccacctcggcaaccgccgggtgcgc
tcggtcggcgagctgatggagaaccagtaccgcatcggcctgctgcggatggagcgggcg
atccgcgagcggatgtcgggcgtcgagatcgacaccgtgatgccgcaggacctgatcaac
gccaagcccgcggccgccgcggtgcgcgagttcttcggctcgtcgcagctcagccagttc
atggaccagaccaacccgctgtcggaagtgacgcacaagcgccgcctctcggcgctcggg
ccgggcggtctgacccgtgagcgcgcgggcttcgaggtccgcgacgttcacccgacccac
tacggccggatgtgcccgatcgagacgccggaaggccagaacatcggcctgatcaactcg
ctcgccacctatgcgcgggtgaacaagtacggcttcatcgagaccccctaccgcaaggtg
gtcgacggcaaggtgaccgacgaggtgcagtacatctcggccaccgaggagatgcgccac
accatcgcccaggcgaacgccgagctggacgacgagggccgcttcacccaggagctgatc
tcgacccggcaggccggcgacttcaccctgaacccggtcgatgcgatcgacatgatcgac
gtgtcgccgaagcagctcgtctcggtcgccgcggcgctgatcccgttcctcgagaacgat
gacgccaaccgcgcgctgatggggtcgaacatgcagcgtcaggcggttccgctgctgcgg
gccgaggcgccgttcgtcggcaccgggatggaagcgacggtcgcgcgcgactcgggcgcg
gccatcatggcccgccgcgggggcgtgatcgaccaggtggacgcgagccggatcgtcgtc
cgcgcgaccgaggatctcggcgccggcgacgcgggcgtggacatctatcgcctgcgcaag
ttcaagcgctcgaaccagtcctcgaccatcaaccagcggccgctgatcaaggtcggtgac
aaggtccagaagggccaggtgatcgccgacggtccctcgaccgaccagggcgagctcgcc
atcggccggaacgtggtcgtcgcgttcatgccgtggaacggctacaactacgaggactcg
atcctgatctcggaacggatccaccgcgacgacgtgttcacctcgatccacatcgacgaa
tacgaagtggcggcccgcgacaccaagctggggccggaagagatcacccgcgacatcccg
aacgtgggtgaagaggcgctgcgcaacctcgacgaggccggcatcgtgtacatcggcgcc
gaggtcggcccgggcgacatcctggtgggcaagatcacccccaagggcgaaagcccgatg
acgcccgaggaaaagctgctgcgcgccatcttcggcgaaaaggcgagcgacgtgcgcgac
acctcgctgcggctgccgccgggggcgtatggcacgatcgtcgaggtgcgggtgttcaac
cggcacggcgtcgacaaggacgagcgcgcgatccagatcgagcgtgaagagatcgaacgc
ctgtcgcgcgaccgcgacgacgagcaggcgatcctcgagcgcaacatctacgctcgcctc
aagtcgctgatctcgggtcagaccgcggtcaaggggccgaagggcgtcaaggccaacagc
gtgatcgacgacgatctgttgggcagcctctcgcgcggccagtggttccagctggcgctg
gccgacgaggccgcggcccgcgaggtcgaggcgctgcaggaccagttcaacgtgcagaag
aaggcgctcgaggcccggttcgacgacaaggtcgaaaaggtccgtcagggcgacgacctg
ccccccggcgtgatgaagatggtcaaggtgtttgtggcggtgaagcgcaagcttcaggcc
ggggacaagatggccggtcgtcacggcaacaagggcgtcgtgtccaaggtcgtgccgatg
gaggacatgcccttcctcgccgacgggaccccggtcgacctggtgctgaacccgctcggc
gtgccgtcgcggatgaacgtcggccagatcctcgagacgcacatgggctgggccgcgcgc
ggcctcggcatccgcatcgacgaggcgctgcaggagttccgcgacaagggcgacctgacc
ccggtccgggaagccatgcggatcggctatggcgacgagaccttcgcgtccgagttcggt
gacatgaccgacgaggatctggtcgagcacgccgaggcggtgcgcggcggggttccgatc
gccacgccggtcttcgacggcgccaaggaggcggacgtcaacgacgcgctgacgcgggcg
ggcttcgatgcctcgggccagtcgatcgtcttcgacggccgcaccggcgagcagttcacc
cgcccggtgacggtgggggtgaagtacatcctgaagctgcaccaccttgtcgacgacaag
atgcacgcgcgttcgaccgggccctacagcctcgtcacccagcagccgctgggcggcaag
gcgcagttcggcggtcagcgtctgggtgagatggaggtctgggcgctggaagcctacggc
gccgcctacaccctgcaggagatgctcacggtcaagtcggacgacgtcgccggccgcacc
aaggtctacgagtcgattgtcaagggcgaggacaacttcgaggccggcgtgccggaatcg
ttcaacgtgctggtcaaggaggtccggggtctgggcctcaacatggagctgctggacgcg
gaggaggatgagtga
DBGET
integrated database retrieval system
