Lathyrus oleraceus (garden pea): 127076779
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Entry
127076779 CDS
T08598
Name
(RefSeq) uncharacterized protein LOC127076779 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127076779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127076779
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127076779
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127076779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
127076779
NCBI-ProteinID:
XP_050874528
LinkDB
All DBs
Position
4:497902775..497922801
Genome browser
AA seq
2406 aa
AA seq
DB search
MTPGSSRIMANFSSTASNQIRFLLNSLNEVNFDSVLQQLSQFTEFGTVGCILLLQTCLDH
LNYVRRDRKDMQHEPILGAVVKYLLDKPNFSTVFSESMKNVDINESFLESFCNGLQLSLL
EKIAISLALSDSENPDARLCGKNFCMAQIEELCTNPGSLSFHEQIHSVIMFLKQSEGLSE
HVDSFMQIISLVQFNDTPPFVLTPMLPDEMHGADFLRWNMEFIHESEENDFDAILADIQK
EMNMGDLVKELGYGCTVDVSQCKEVLSLFLPLTDNMLSKLLGAIAHSHAGLEDNQSTFLT
FGAALGYNNLSELPPLNSWNIDVLIDTVKSLAPQTSWVRVIENLDHEGFYLPSEEAFSFL
MSVYKHACKEPFPLRAVCGSVWKNTEGQLSFLKYAVTAPPEMFTFAHSARQLAYADAIHG
HKLQNGHANHAWLCIDLLDVLCQLAEKGHASVVWSILDYPLKHCPEILLLGMSHVNTTYN
LFQREVSLIVFPMIVKSDVGSGMILHLWHINPNLVLRGFMDSQNDDVGSIVRIVDICQEL
KILLPVVEVIPYYYSIRLASVASRKDILDLEKWLSNNLTTYKDAFFEECLKFLKEVQSVG
SHNLSDQSFHLSGGVLNFFTETTATFLKVLKSHTDLVTSGLLSEELESLHISIIDSNPRL
QNSETTDSPTSTQFPNDVEDKANAIFQEMFHDKISVPSVVQTLIRFSGSSVKRDNMIFEC
MIANLFEEYKFYPRYPEMQLKIAGLIFGSVIKHHLVTHLSLGIALRYVLDALRKPADSKM
FMFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSGHTDVDGTT
HASAVISNHSSAQATLGHVELSGSSIIQPGQQHLSMQLQQRRDNSLDDSHKTSVGSSTDM
KPPLASLGQSSVIIPADTSSGNKLHNPVSASSMLSSSPGFVRPSRGTTSTRFGSALNIET
LVAAAEKRETPIEAPGSEVQDKISFLINNISSTNTEAKAKELTEILKEQYYPWFAQYMVM
KRASIEPNFHDMYLKFLDKVNSKALNRAIILATYENCKVLLGSELIKSSSEERSLLKNLG
SWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKVLEPCQNSLAYQPPNPW
TMGILGLLAEIYSMPNLKMNLKFDIEVLYKNLGVDMKDVTPTSLLKDCKREIEGNPDFSN
KDVGASSQMISDIKSSLVPPVNQVELPLEVTNPSNSGAHPHIVSQYAGPIHIPSGTLMED
EKVAPLSLSDQLPSAQGLLQANTAPAPFQLPTQIHTIGTHVIINPKLSGFGLQMHFQRAV
PIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESEEKRIKNAAHLMVASLAGSLA
HVTCKEPLRTSISNQLKTSLQSLNIGNEILDQAVQLVTNDNLDLGCAVIEHAATDKAINT
IDTEISQQLSLRKKQREGMGSTFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFV
RLPWQNQSSQSSHSMSASVSVQSANSGITGTSAPASGQINPGYSLTTGYEGLSRPIDDMP
EPNFTPHYSASSINIRAADNVSQHSMEKDSVASFPSTASTPELHAVDSSDAVKESGSSSQ
PLVSSGAVERIGSSFLESSLSTRDALDKYQIVAQKLEALVNNDSREAEIQGVISEVPEII
LRCVSRDEAALAVAQKVFKGLYDNASNNVHVYAYLAILTAIRDVCKLAVKELTSWVIYSD
EERKYNKDITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVIDEPKVVS
ELHNLIDALAKLTTKPGYPESLQQLIEMIKNPVALSASNAGKEDKLRLSRDNKGPSLLVG
NREELNIVDSAKPDPAGFREQVSKLFAEWYRICELPGAIDTSATHFIVQLHQSGLLKGDD
MTDRFFRLLMEIAVAHCLSTEGINSGALQSPQQMLSMSFIAIDVYAKLVFSILKGSSKLF
LLSKILAVTVRFIVKDAEEKKVSFNPRPFFRLFINWLLDLGSLEPVTDGANLQILTGFAN
AFHALQPLKVPGFSFAWLELVSHRSFMPKMLTGNLQKGWPYIQRLLVDLFQFMEPFLRHA
ELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRL
PDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKADIDEYLQTREQPSPLLSELKEKL
LLSPNEAASAGTRYNVPLINSLVLHVGMQAIEQLKSRAPHAQSPQTTYGLAVFSVGAALD
IFQTLIVDLDTEGRYLFLNAVANQLRYPNTHTHYFSFVILYLFAESNQEIIQEQITRVLL
ERLIVNRPHPWGLLITFIELIKNLRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVEES
MVSGWV
NT seq
7221 nt
NT seq
+upstream
nt +downstream
nt
atgactcccggttcctcgcgaatcatggccaatttttcctccacagcttccaatcagatt
cggttcctgctcaactccttgaacgaagtcaactttgactccgttctccagcaactttct
cagttcactgaatttggaaccgttggatgcattttgctgctccaaacttgcttggatcac
ttaaattatgtcagaagagatagaaaagatatgcagcatgagccaattcttggggcagta
gttaagtacctcttggacaaaccaaacttcagcacagtattttctgagtcaatgaagaat
gtagacattaatgaaagctttctcgaaagcttttgtaatggattacagctgtctttactg
gagaaaattgccatcagtcttgctttatctgattctgaaaatcccgatgccaggctatgt
ggcaagaatttttgcatggctcagattgaagagttgtgtacgaatcctggttctctgagt
ttccatgagcaaattcacagtgttatcatgttcctcaagcagtctgagggtctctctgag
catgtagattcctttatgcagataatatcgctggtgcagttcaatgacacaccacctttt
gttttgaccccgatgctacctgacgagatgcatggggctgattttttgaggtggaatatg
gagttcatccatgagagtgaagaaaatgattttgatgctattttggcagacatacagaag
gaaatgaacatgggggatcttgtgaaggaactaggttatggatgcacagttgatgtctca
cagtgcaaggaagtattgtcactcttcttacctttaacggataatatgctctctaaatta
cttggtgctattgcacactctcatgctgggctggaggataaccagagcacattcttaact
ttcggcgcagcccttggatacaataacttgtccgagttaccaccacttaactcttggaat
attgatgtgttgatagatacggtcaagagtctcgcaccacaaaccagttgggtccgtgtt
attgaaaatcttgatcatgaaggattttaccttcccagtgaagaagcattctcttttctt
atgtctgtttataaacatgcctgtaaggaaccatttccgctccgcgctgtctgcgggtct
gtctggaagaataccgagggtcagctgtctttccttaaatatgctgtaaccgcaccgcca
gaaatgtttacatttgcacactctgcgaggcaactggcatatgctgatgcaattcatggc
cacaagcttcaaaatggacatgcaaatcatgcctggctgtgtatcgaccttttggatgtc
ctctgccagctagctgagaagggtcatgccagtgttgtttggtcaatcctggattatccc
ctaaaacactgtccagaaatattgcttcttgggatgtcacatgttaatactacttacaac
ctcttccagcgagaagtatctctgattgtttttcccatgatagtaaaaagtgatgttggt
agtggaatgattctacacctttggcacataaatcccaatctggtcctgcgaggctttatg
gattctcaaaacgatgatgtaggcagcattgtgagaattgtagacatctgccaagagctt
aagattctattaccggtggtggaagttattccctattattatagtataaggttagcgtct
gttgcttcaagaaaagatattcttgatcttgagaagtggttgagtaacaatttaactaca
tacaaggatgccttctttgaggaatgcctaaagtttttgaaggaagttcaatctgtggga
tcacataatctatctgaccaatcttttcatctgtctggtggtgttctgaatttctttacc
gaaacaactgctacatttttgaaggttctcaaatctcatactgacttggttacctctgga
ctactttctgaggagctggagagtttgcatatatctattatagattcaaatccaaggctt
caaaatagcgagactactgattcacctacttctacacaatttccgaatgatgttgaagat
aaagcaaatgcgatcttccaagagatgtttcatgataagatatctgtaccttcagtggtg
caaacactaatccgattcagcgggtcttctgtgaagagagacaatatgatttttgaatgc
atgattgcaaacttgtttgaggagtataagttttacccaaggtatccagaaatgcaactc
aaaattgccggacttatctttggttctgtgattaagcatcatcttgtgacacatctctcg
cttgggatagctcttcgatatgttcttgatgcattgcgcaagcctgcagattctaaaatg
tttatgtttggaagtttggcactggagcaatttgtggatcgtcttattgagtggcctcag
tattgcaatcacattttgcaaatttcccatttgcgcagcacacattccgaaatagttgct
ttcatcgaacaggctcttgctaggatatcctctggtcatacagatgtagatgggacgact
catgcttccgctgttatcagtaaccatagttctgcacaagctacattaggtcatgtagag
ctcagcggctccagcatcatacaacctgggcagcagcatttgtcaatgcagcttcaacag
agacgtgataattctctggatgattctcacaagacctctgttggttcttcgactgatatg
aaacctccgttagcttctctagggcaatcttcagtgattataccggctgatacttctagt
ggcaataagttacataacccagtcagtgcctcatcaatgttatcttcttctcctggtttt
gtccgtccgtctcgcggaaccacttctaccaggtttggatctgccttgaatattgaaact
ttggtcgctgctgcagagaaaagagaaactcctattgaggctccagggtcagaggttcag
gacaagatatcattcctaattaataatatatcttctactaataccgaagccaaagcaaaa
gagctcactgaaattttgaaagagcagtactatccatggtttgctcagtatatggtcatg
aaaagagcaagcattgagccaaatttccatgacatgtacctgaaattcttagacaaagtt
aattcaaaggctttgaacagagcaattatcctggcaacatatgaaaattgcaaggttctt
ttaggatctgaacttataaagtcaagttctgaagagcgctctttgcttaaaaatctgggt
agctggcttggaaagttgacaattggacggaatcaagttttgagggctcgtgaaatagat
ccgaaatctttgattatagaggcatatgagaaggggctgatgattgctgttattccattt
acttcaaaggtccttgaaccatgccaaaacagtcttgcatatcagccccctaatccttgg
accatgggcattttaggattgcttgctgaaatttattcaatgccaaacttgaaaatgaac
ctcaagtttgacatagaggttttatacaaaaatctcggcgtagatatgaaggatgtcaca
ccaacttctctcctgaaggattgtaaaagagaaattgaaggaaaccctgatttctctaat
aaagatgttggagcatcatcacagatgatttctgatataaaatccagccttgttcctcca
gtaaatcaagtagagctaccacttgaagtcaccaatccatccaatagcggggctcatcca
catatagtatctcagtatgctggcccaattcatattccctctggaacattgatggaagat
gagaaagtagcacctctgagcttatctgatcaattaccttctgctcaaggactgttacag
gcaaatactgctccagcacctttccagctcccaacacagatacatactattggaactcat
gttattataaatccaaagctcagtggttttgggttacagatgcattttcaaagagcggta
cctattgcaatggacagagccatcaaagaaatagtgtccagtattgtgcagcgtagcgtt
tccatagcaacccagacaacaaaggaacttgttttaaaggattatgctatggaatcagag
gagaaacgtattaaaaatgccgcacacttgatggttgctagtctggctgggagtttggct
cacgtgacgtgcaaagaacctttacggacatcaatatcaaatcaactgaagacttcactt
cagagtttaaatattggaaacgaaattttggatcaagctgtgcaacttgttaccaatgat
aatctagatcttggttgtgcagtaattgaacatgccgccactgacaaggcaattaacacc
atcgatacagagattagtcaacaactttctttgagaaagaagcagcgagaaggtatgggt
tctacattttttgatgcaaacttgtatccacaaggttctatgggtggtgttccagagccc
cttcgccctaagcctggtcagttgtccctgtcacaacagcgtgtctatgaggactttgtt
cggcttccttggcaaaaccagtctagccagagttcacattcaatgtccgcgagtgtttct
gttcaatctgctaatagtggtattactggcaccagtgctcctgcatctggacagataaac
cctggctactctctaaccacaggatatgagggactctctcgaccaatagatgatatgcca
gaacctaattttactccacattatagtgcttcctcaattaacattagagcagccgacaat
gtttcccaacatagtatggagaaagactctgttgcctcgttcccttcaactgcttccacc
cctgagttgcacgcagtggattcttcagatgctgtgaaagaatctggatcttcttcccag
ccactggtttcatcaggtgccgtggagcgcattggaagtagcttcttggaatcatctctc
tctacaagggatgctctggataaataccagattgttgcacaaaagttggaggctctggtc
aacaatgattcgagggaggcagaaatacagggagtcatttctgaggtgcctgaaatcata
ctcagatgtgttagtcgagatgaggcagctttagctgtggctcaaaaggttttcaagggt
ttatatgacaatgcttcgaacaacgttcatgtttatgcatatcttgcaatcctgactgcc
attcgtgatgtttgcaagcttgctgtcaaagagcttactagttgggtaatttactcggat
gaagagaggaaatacaataaagatattactgttggtctcatccgcagtgaactactaaat
ctaacagagtacaatgttcacatggcaaaacttattgacgggggaagaaacaaggctgct
acggagttttcaatctctcttcttcaaaccctggtcattgacgaaccaaaagttgtttca
gaacttcacaatcttatcgatgctttggcaaagcttactacaaagcctggataccccgaa
tcgttgcaacaactcattgagatgatcaagaatcctgttgctttatctgctagtaatgct
ggaaaggaagataaattgaggctatctagagacaataagggtcctagtctgctagttgga
aaccgggaagagttaaacattgtagattctgccaaacctgatcctgctggattccgtgag
caggtgtccaagttgtttgctgaatggtataggatatgtgaacttcctggtgccattgat
acatctgctacccacttcatcgtacagttgcatcagagtgggctgcttaagggggatgat
atgacagatcgctttttccgtctgttgatggaaatcgcagttgcacattgcttatccact
gaggggattaattcaggggcactgcaatctcctcaacaaatgctgtcaatgtcatttatc
gcaattgatgtttatgcaaagcttgtcttctcaatcttgaagggatcaagcaaactcttt
cttctctccaagattctagcagttactgtcagattcattgtaaaagatgcagaggagaag
aaggtctcttttaatccaagaccatttttcagactgttcatcaactggcttctagatctt
ggctcacttgagcctgttactgatggtgcaaatctccagattttgactgggtttgccaat
gcatttcatgctctgcagccactcaaagttcctggattcagttttgcttggctggagttg
gttagtcaccggagcttcatgccaaaaatgctgactggtaaccttcaaaaaggttggcct
tatatccaaaggttgcttgtagatttgttccaatttatggagccttttctgaggcatgcc
gagctaggagatccggtccgtgttctctacaagggaacacttagggtgctcttggtgcta
cttcatgacttcccagagttcctttgtgactatcactttaccttttgtgatgtgatacct
ccaagttgcatacagatgcgaaatattattctaagtgcatttccgcgtagtatgaggctg
ccagacccttcaactccaaatttgaagattgatttgcttcaggaaataactcaatcccct
cgcattctttctgaggttgatgcagcattgaaagcaaagcagatgaaggctgacatagat
gaataccttcagacaagggaacaaccttctccacttttatctgaattaaaagagaagctg
ctactctcaccaaatgaagctgcctctgccggcactcgttacaatgtgccattaatcaac
tcccttgtactgcatgttggaatgcaggcaattgagcaactcaagtctcgagctccccat
gcacaatcaccacaaactacatacgggctggctgtattttctgttggagctgctttggat
attttccagactttaatcgttgacttggatacggaagggcgataccttttcctaaatgct
gttgctaaccaactgcgttatcccaatactcacacacactacttttccttcgtcatcctt
tacttgtttgcagaatcaaaccaggaaattatccaagaacaaattacaagagtcttgcta
gaacgccttattgtaaatcgacctcatccatggggcctccttattactttcattgagctg
attaagaatctaaggtataatttctggaaccggtcattcataagatgcgcaccagagatt
gaaaaactttttgaatcagtctcaagatcttgtggaggtccaaaaccagtggaagagagt
atggtttcgggctgggtctaa
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