Lathyrus oleraceus (garden pea): 127086553
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Entry
127086553 CDS
T08598
Name
(RefSeq) uncharacterized protein LOC127086553
KO
K18734
protein SMG8
Organism
psat
Lathyrus oleraceus (garden pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127086553
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
127086553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
127086553
NCBI-ProteinID:
XP_050883286
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All DBs
Position
5:complement(571541150..571548307)
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AA seq
1216 aa
AA seq
DB search
MLMETRNPSPSPVRVLIRPPPSSSASSSSSSSATVHPTSAPPPSSDGVVVVGFISRRHDD
STHLLNRVIDSNVFASGNLDKALLIDNEEASEWFKRRRISYFRDRDKGILFLHFSSARCS
TVHDSDETSPGFDSVVEEHEFGDLQGMLFMFSVCHVIIYNQEGSQFGTRVLKNFRVLQAA
KHAMAPFARSQGAPPLPSRVHSAASLSSRATLSGNNSSPGRGVGVGNLNRNASAVSLMSG
LGSYTSLFPGQCIPVMLFVFVDDFSDLSVSNTNGEDSSDVSSLNQSSSLSSVAKANLAAT
KGSGSVVVLARPASRSEGGLRKKLQSSLEAQFRFLIKKCRTLSGSEVTHSGVRTGASSAS
TALFSLDASRAVVLLDRLSVNKGESLEFATGLVEDVLNGKATSDSLLLESHGQIASKEDL
ISIKEFIYRQSDILRGRGGLVNTNSGSGVGMVAVAAAAAAASVASSKTLTAPDLPSFETW
LTSSRHILSRIFCAKGGCLDELENFKRRPRPRNPVSPAMEESLKGTDPLDVAVSWLQCGR
GLNTKFSTLWCQRAIPAAKEIYLKDLPACYPTSEHETHLDKALHAFQSKVKGPAVQIFAK
TLEEECSSIWKSGRQLCDAVSLTGKPCRHQRHDVDGSNSELGSLSKPHSSGYFFLHACAC
GRSRQLHPDPFDFESADACCFFDCDKLLPAVKLPETEVEGPVHSSAWSLLRIGGSRYYES
SKGLLQSGFCATEKYLLKWTIYLEKHKRLNGSTESIVKQNSVIRGSNVEYIADAKETGDR
QTHSAVESGVEDYRTPLDITKADNKDISFGRGFPIFKMRKPFSEVVAGSAAVDSGFPPLQ
QRKLPTLGSEKDMKQSRPSNQNTERINATIDHQISLKFQDVSFTEGPLHGSGNNNRRDSD
PFLRIGSNVVPVHLNGGERSKPHSSLKHVIVNVGFEHECPRGHRFLLSADHLTELGSFYS
PSDESHLSSSMEPTERNQASHTRVSNNASWSKVHRSSNEILSPSINKERDVGKSNEVIPN
GYLNANGPVYTSIPLKEKNLTSVNILAKPPNLMKDSGRDMHANIKGDDELALSMLNRNLP
IYMICPHCRRSRNKKDTAEVKFASGISQLKRIFMVTPAFPVILATCPVVQFETSCLPPSV
PDRERKLQFSLGCQVILPPDSFLTLKLPFVYGVQLEDGNKHPLNPFEQQPEMTAWITKGT
VLQILSKGSSDEGYQT
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttaatggagactcgaaacccttctccatccccggttcgagttctcattcgtccacca
ccgtcttcttccgcttcttcttcctcctcctcctccgccaccgttcatcccacatcggcg
ccacctccttcctccgacggtgtagtagtcgtcggttttatatcgcgacgacacgacgat
tcaactcacctgctcaaccgagtcatcgattctaacgtcttcgcttctggtaacctcgat
aaggcgttactcatcgataatgaagaagctagtgaatggtttaagcgtagaagaattagt
tactttcgtgaccgtgataaggggattttgtttcttcacttctcttctgctcgttgttcg
accgttcacgattcggatgaaacttcgccgggattcgattctgtcgttgaagagcatgag
ttcggtgacctacagggaatgcttttcatgttctctgtttgtcatgttatcatatataat
caggaggggtcacagtttggtactagggttttaaagaattttcgtgtgctacaagcagca
aagcatgctatggctccgtttgctaggtcacaaggtgcgccacccttaccgtccagagtg
cattctgcagcttcattatcttctcgagctaccttgtcagggaataattcttctccggga
agaggtgttggtgttggtaacttgaatcgcaatgcgtcagctgtgtctctcatgtcaggt
ttaggatcttatacttctttgtttccgggacagtgcatacctgtgatgttgtttgtgttt
gtggatgacttctctgatttatcggtttccaatacgaatggggaggactcttcggatgtc
tcttcgcttaaccagtcttctagtttgagtagtgtagccaaggcaaatctggctgctact
aaaggttctggttcagttgttgtactggcacgtcctgcaagtcgatctgaaggtggactt
aggaagaaactacagtcgtctcttgaagcgcaatttcgctttttgattaagaaatgtaga
acattatctggctctgaagttacacactctggtgtgagaactggggcttcttcagcttct
acagctctcttttcacttgatgcatcaagggcagttgttttgttagatcgactttcagtt
aataaaggtgaatctcttgagtttgccacaggacttgttgaagatgtcttgaatgggaaa
gcaacctcagattctcttctgctggaaagccatgggcaaatagcaagcaaagaggattta
atatcaattaaagagttcatttacaggcagtctgatattttgagagggagaggggggcta
gttaataccaacagtggctctggtgttggtatggttgctgtggcagcagcggcggcggct
gcctcagttgcttctagcaaaacattaactgctcctgatcttccaagttttgaaacttgg
ttaacttcaagtcgtcatatcttgagtagaattttctgtgcaaaagggggttgtttagat
gaattagaaaattttaaaagaagacctcgtccaaggaaccctgtttcacctgcaatggaa
gaatctttgaagggtacagatcctttagatgttgcagtatcttggttacaatgtggtaga
gggttgaacactaagttttcaactttgtggtgccaaagagccattccagctgcaaaggag
atatatttgaaagatttgcctgcttgttatcccacatcagaacatgaaactcacttagat
aaggctttgcatgcatttcagtcaaaggtaaaaggacctgcagtgcaaatttttgcaaaa
acgttggaagaggaatgctcttccatttggaaatcaggaaggcaactatgtgatgctgtt
agtttgacgggcaaaccgtgcaggcaccaaaggcatgatgtcgatggcagtaattcagaa
ttgggatctttgtccaagccacattcaagtggctactttttcctgcatgcctgtgcttgt
ggccgttcacgacagttacacccagacccgtttgattttgaatcagctgatgcttgctgc
ttctttgactgtgataagctacttcctgcagtcaaactaccagaaactgaagttgaagga
cctgttcattcttctgcttggagtttgctgcgtattggaggttcaagatactacgaatct
tccaaaggcttacttcagagtggattttgtgctactgagaaatatcttctgaaatggaca
atatacttggagaaacataaaaggctaaatggttcaaccgagagcatagtgaaacagaat
tctgtaattaggggatctaatgttgaatatattgcagatgcaaaagaaaccggtgataga
caaactcactctgctgtggagagtggagtggaagactatagaacacctttagatattact
aaagctgataacaaagatataagtttcggtagaggttttcccattttcaaaatgagaaag
cctttttctgaggttgttgctggatcagcggccgttgattcaggattccctcctctccag
caaaggaaattgcctacattaggttcagagaaagatatgaaacaaagcaggccaagtaat
cagaatacagaaaggattaatgcaacgatcgatcatcaaatatctctaaaatttcaagat
gtgtcatttactgagggacctcttcatggcagtggaaataataatcgcagagacagtgac
ccttttttgaggataggtagcaatgtagtacctgtacaccttaatggcggtgaaaggagc
aaaccccattcttctttaaagcatgtaatcgtcaatgttggatttgaacatgaatgcccc
cgtggccatcgtttcctgttaagtgcagatcatctcactgaacttggatccttttactca
ccatctgacgaatctcatttatcttcttctatggagcccactgaaagaaatcaggcatct
catactagagtaagcaataatgcttcctggtccaaagttcatcgaagctcaaatgaaatt
ctttctccatccattaataaggaaagagatgttggaaagtcaaatgaagtcattcctaat
ggttatctgaatgctaatggaccagtatatacttctattccactgaaggaaaaaaatttg
acatctgtgaatatattggcaaaaccccccaatcttatgaaagatagcggacgggatatg
catgctaatatcaagggtgatgatgaacttgcattgtccatgctgaaccgaaatttgcct
atctatatgatctgtcctcattgcaggcgttctaggaataagaaagatacagcagaggtt
aagtttgctagcggtatctcacagcttaaaaggatttttatggtcacaccggcgtttcct
gtgatactagcaacatgccctgttgtgcaatttgagacgtcatgcctgcctccatcagtt
ccggatcgtgaacggaaattgcagtttagccttggatgtcaagtgatcttgccaccagat
agtttccttacccttaaattaccatttgtttacggtgtgcagcttgaagatggaaacaag
catcctcttaatccctttgaacaacagccagaaatgactgcctggataaccaagggcaca
gtactgcagatcttgtccaaagggagcagtgatgagggatatcaaacatag
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