Pseudoxanthomonas spadix: DSC_10660
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Entry
DSC_10660 CDS
T01643
Name
(GenBank) long-chain acyl-CoA synthetase (AMP-forming)
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd00061
Fatty acid biosynthesis
psd00071
Fatty acid degradation
psd01100
Metabolic pathways
psd01212
Fatty acid metabolism
psd02024
Quorum sensing
Module
psd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DSC_10660
00071 Fatty acid degradation
DSC_10660
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSC_10660
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psd01004
]
DSC_10660
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psd04147
]
DSC_10660
Enzymes [BR:
psd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DSC_10660
Lipid biosynthesis proteins [BR:
psd01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
DSC_10660
Exosome [BR:
psd04147
]
Exosomal proteins
Exosomal proteins of breast milk
DSC_10660
Exosomal proteins of breast cancer cells
DSC_10660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
LpxD
Motif
Other DBs
NCBI-ProteinID:
AER56776
UniProt:
G7UP82
LinkDB
All DBs
Position
complement(2107155..2108654)
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AA seq
499 aa
AA seq
DB search
MSAPVSQALFDALRGVPERVIVADGGIGDAALAGRVRSLAERLQRAGTTCIASRLDNGVA
WLELDLALRLIDGVHVPLPTFFSAEQVDHALASSGAQAVIVAEATPLPAGAPVLGPPLAG
TGLAGWRLAADRPVALPTGTACVTYTSGTTGRPKGVCLDGASLLTVAGSLVQASSAIAPR
RHLCLMPLSTLLENVAGLYAALLADAQIALPSLSEIGYTGASGLDVPTLLGCLHRYQPES
VILVPQLLLALVMAAEQGAPLPASLRYIAVGGGRVGPALLARAQALGLPVFEGYGLTECA
SVVCLNRPGAQRAGSVGQALPHARVSFDGGEILVDGVRALGYLGGEALAPGPVRTGDLGH
LDGEGFVHITGRRKNVFITSFGRNVSPEWVESELLQHPVLAQAVVWGEAQADNIAVLWPR
RPDADDALIAQALAEVNAGLPDYARVARFVRARAPFTAADGLLTANGRPRREAILSRYQS
EVDACYRRPATIPASGVAA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgccggtctcacaggccttgttcgatgcgctgcgcggggtcccggagcgggtc
atcgtcgccgatggcggtatcggcgatgcggccttggccgggcgcgtgcgcagcctggcc
gagcgcctgcagcgcgccggcacgacctgcatcgccagtcgcctcgacaacggggtggcc
tggctcgaactggacctggccctgcgcctgatcgacggggtgcacgtgccgctgccgacg
ttcttctcggccgagcaggtggaccatgcgctggcgtccagcggcgcgcaggcggtgatc
gtggccgaagccacgccgctgcctgccggtgccccggtgctcgggccgccgctggccggc
accgggctggccggctggcgactggctgccgatcgcccggtcgcgctgccaaccgggact
gcctgcgtcacctacacctccggcaccaccggccggcccaagggcgtgtgcctggatggc
gccagcctgctgaccgtggccggttcgctggtgcaggcctccagcgccatcgccccgcgc
cgccacctgtgcctgatgccgctgtccacgctgctggagaacgtcgccgggctctacgcc
gcgctgctggccgatgcccagatcgcgctgccgtcgttgagcgagatcggctacaccggt
gcctccggcctggacgtgcccaccctgctcggttgcctgcaccgctaccagcccgagagc
gtgatcctggtgccgcagctgctgctggcgctggtgatggcagccgaacagggcgcgccg
ttgccggcctcgttgcgctacatcgcggtgggcgggggccgggtcggcccggcgttgctg
gcacgcgcccaggcgctgggcctgccggtgttcgaaggctatggcctgaccgaatgcgcc
tcggtggtgtgcctgaaccggcccggggcgcagcgcgccggcagcgtcggccaggccctg
ccgcatgcccgggtgtccttcgatggcggcgagatcctggtcgatggcgtgcgcgcgctg
ggctacctcggcggtgaagcgcttgcgcccgggccggtgcggaccggcgacctgggccac
ctggacggcgaggggttcgtgcacatcaccggccgccgcaagaatgtgttcatcacctcc
ttcgggcgcaacgtctcgcccgagtgggtcgaaagcgagctgctgcagcacccggtgctg
gcccaggcggtggtctggggcgaggcccaggccgacaacatcgccgtgctctggccgcgc
cggcccgacgccgatgacgcgctcatcgcccaggccctggccgaggtcaacgccggactg
cccgactacgcgcgggtggcgcgattcgtccgggcccgggcgccgttcaccgccgccgac
ggcctgctcaccgccaacggccgcccgcgccgcgaggcgatcctgtcccgctaccagtcc
gaggtggatgcctgctatcgccgcccggctaccatccccgcttccggagttgccgcatga
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