Pseudonocardia sp. EC080625-04: FRP1_15565
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Entry
FRP1_15565 CDS
T04054
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psee
Pseudonocardia sp. EC080625-04
Pathway
psee00470
D-Amino acid metabolism
psee00550
Peptidoglycan biosynthesis
psee01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FRP1_15565 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FRP1_15565 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psee01011
]
FRP1_15565 (murD)
Enzymes [BR:
psee01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
FRP1_15565 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psee01011
]
Precursor biosynthesis
Amino acid ligase
FRP1_15565 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_8
AlaDh_PNT_C
AdoHcyase_NAD
FAD_binding_3
Pyr_redox
Pyr_redox_2
HI0933_like
CheB_methylest
GIDA
CbiA
Motif
Other DBs
NCBI-ProteinID:
ALE76360
LinkDB
All DBs
Position
complement(3360516..3361979)
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AA seq
487 aa
AA seq
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MTGAGFAGRPVLVAGAGISGLAAATALRDAGARVLVSDDSSAALDTLPDGVEPWPGAGLP
DGVATVVTSPGRRPEHPLVAEAAAVGAEVIGEPELAWRLGAARATPPSWLVVTGTNGKTT
TTEMLAAILQEAGLRSVACGNIGYPVVSAVSAPGPGHEVLAVELSSFQLHWSPSVRPAAG
VVLNVAEDHLDWHGGRDGYAAAKARALTGAVAVGGVDDPVAARLLAAAPAPRRVGITLGE
PGPDQLGVVDGTLVDRAFGGGELLAADAVVPPGPPGVTDALAAAALARAYGVAARHITTA
LAAFAPGPHRSAPAGEHDGVVYLDDSKATNPHAAGAALAAIAARRPGARAVWVVGGLLKG
VAPDELGRLAREHAALLAGIVVIGTDRAPIVEALSRHAPGLPVEEVAAVHDGGMAPSDLP
DPARTDARPDPMPSAVRRAAALARPGDVVLLAPAAASMDQFRDYAHRGDAFAAAVAGLGA
PAGGLSR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggcgcgggcttcgcgggacgtccggtgctggtggccggtgccgggatctcgggg
ctggccgccgcgaccgcactgcgcgacgccggagcccgcgtcctggtctccgacgactcg
tccgccgcgctggacaccctgcccgacggcgtcgagccgtggcccggcgccgggctgccc
gacggggtcgcgacggtcgtcacctcgccgggccgccgtccggagcacccgctggtcgcc
gaggccgccgcggtgggcgccgaggtcatcggcgagcccgagctggcgtggcggctcggt
gccgcgcgggcgaccccgccgtcctggctggtcgtcaccggcaccaacggcaagacgacg
accaccgagatgctcgccgcgatcctgcaggaggccgggctgcgctcggtggcctgcggg
aacatcggctacccggtggtgagcgcggtgagcgcgcccggcccggggcacgaggtgctc
gcggtcgagctgtccagcttccagctgcactggtcgccgtccgtgcggccggcggcgggt
gtcgtgctgaacgtcgccgaggaccacctggactggcacggcggccgggacgggtacgcc
gcggcgaaggcgcgggccctgaccggagccgtcgcggtcggcggggtggacgacccggtc
gccgcccgcctgctcgccgccgcgcccgcgccgcgccgcgtcgggatcaccctcggcgag
cccgggccggaccagctcggggtcgtcgacggcacgctcgtcgaccgggcgttcggcggc
ggggagctcctggcggccgacgccgtcgtcccgccgggaccgcccggggtgaccgacgcg
ctcgccgcggcggcactggcccgcgcgtacggcgtggcggcccggcacatcacgacggcg
ctggcggcgttcgcgccggggccgcaccgcagcgccccggccggcgagcacgacggcgtc
gtctacctcgacgactccaaggccaccaacccgcacgccgccggtgccgcgctggccgcg
atcgccgcccggcgtccgggcgcccgcgcggtgtgggtcgtcggcgggctcctgaagggc
gtcgcgccggacgagctgggcaggctggccagggaacacgcggcactgctggccgggatc
gtcgtgatcgggacggaccgggcaccgatcgtcgaggcgctgtcccgacacgcgcccggc
ctcccggtcgaggaggtcgcggcggtccacgatggtgggatggcgccctccgacctgccg
gaccccgcccgaaccgacgcccgccccgaccccatgccgtccgcggtccgccgcgcggcg
gcgctggcccggcccggcgacgtcgtgctcctggccccggcggccgcgtcgatggaccag
ttccgcgactacgcccaccggggcgacgcgttcgcggccgccgtcgccggactcggcgcc
ccggccggagggctgtcccgatga
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